Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03443

Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03442 and H281DRAFT_03443 are separated by 39 nucleotidesH281DRAFT_03443 and H281DRAFT_03444 are separated by 78 nucleotides H281DRAFT_03442: H281DRAFT_03442 - mannose-6-phosphate isomerase, type 2, at 523,469 to 524,983 _03442 H281DRAFT_03443: H281DRAFT_03443 - Undecaprenyl-phosphate glucose phosphotransferase, at 525,023 to 526,399 _03443 H281DRAFT_03444: H281DRAFT_03444 - Sugar-transfer associated ATP-grasp, at 526,478 to 527,542 _03444 Position (kb) 525 526 527Strain fitness (log2 ratio) -1 0 1 2at 524.099 kb on + strand, within H281DRAFT_03442at 524.100 kb on - strand, within H281DRAFT_03442at 524.145 kb on + strand, within H281DRAFT_03442at 524.217 kb on - strand, within H281DRAFT_03442at 524.316 kb on + strand, within H281DRAFT_03442at 524.317 kb on - strand, within H281DRAFT_03442at 524.317 kb on - strand, within H281DRAFT_03442at 524.846 kb on + strandat 524.847 kb on - strandat 524.928 kb on - strandat 525.022 kb on + strandat 525.596 kb on + strand, within H281DRAFT_03443at 525.616 kb on - strand, within H281DRAFT_03443at 526.188 kb on + strand, within H281DRAFT_03443at 526.395 kb on - strandat 526.503 kb on + strandat 526.641 kb on - strand, within H281DRAFT_03444at 526.641 kb on - strand, within H281DRAFT_03444at 526.670 kb on + strand, within H281DRAFT_03444at 526.845 kb on + strand, within H281DRAFT_03444at 527.041 kb on - strand, within H281DRAFT_03444

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C)
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524,099 + H281DRAFT_03442 0.42 -0.2
524,100 - H281DRAFT_03442 0.42 +0.0
524,145 + H281DRAFT_03442 0.45 -0.1
524,217 - H281DRAFT_03442 0.49 +0.6
524,316 + H281DRAFT_03442 0.56 -0.4
524,317 - H281DRAFT_03442 0.56 +0.9
524,317 - H281DRAFT_03442 0.56 -0.0
524,846 + -0.2
524,847 - -0.0
524,928 - +1.4
525,022 + +1.6
525,596 + H281DRAFT_03443 0.42 +1.8
525,616 - H281DRAFT_03443 0.43 +0.8
526,188 + H281DRAFT_03443 0.85 -0.1
526,395 - -0.7
526,503 + +0.2
526,641 - H281DRAFT_03444 0.15 -0.7
526,641 - H281DRAFT_03444 0.15 -0.3
526,670 + H281DRAFT_03444 0.18 +0.7
526,845 + H281DRAFT_03444 0.34 -0.1
527,041 - H281DRAFT_03444 0.53 +0.4

Or see this region's nucleotide sequence