Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02007 and H281DRAFT_02008 are separated by 248 nucleotides H281DRAFT_02008 and H281DRAFT_02009 are separated by 80 nucleotides H281DRAFT_02009 and H281DRAFT_02010 are separated by 341 nucleotides
H281DRAFT_02007: H281DRAFT_02007 - phosphoenolpyruvate--protein phosphotransferase, at 123,919 to 125,667
_02007
H281DRAFT_02008: H281DRAFT_02008 - phosphocarrier protein, at 125,916 to 126,185
_02008
H281DRAFT_02009: H281DRAFT_02009 - PTS system, ascorbate-specific IIA component, at 126,266 to 126,754
_02009
H281DRAFT_02010: H281DRAFT_02010 - glutathione synthase, at 127,096 to 128,052
_02010
Position (kb) 126
127 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 125.294 kb on + strand, within H281DRAFT_02007 at 125.294 kb on + strand, within H281DRAFT_02007 at 125.366 kb on + strand, within H281DRAFT_02007 at 125.367 kb on - strand, within H281DRAFT_02007 at 125.434 kb on + strand, within H281DRAFT_02007 at 125.434 kb on + strand, within H281DRAFT_02007 at 125.434 kb on + strand, within H281DRAFT_02007 at 125.435 kb on - strand, within H281DRAFT_02007 at 125.435 kb on - strand, within H281DRAFT_02007 at 125.435 kb on - strand, within H281DRAFT_02007 at 125.574 kb on - strand at 125.574 kb on - strand at 125.581 kb on + strand at 125.581 kb on + strand at 125.581 kb on + strand at 125.582 kb on - strand at 125.609 kb on + strand at 125.609 kb on + strand at 125.609 kb on + strand at 125.609 kb on + strand at 125.610 kb on - strand at 125.610 kb on - strand at 125.629 kb on - strand at 125.680 kb on + strand at 125.680 kb on + strand at 125.680 kb on + strand at 125.680 kb on + strand at 125.681 kb on - strand at 125.681 kb on - strand at 125.681 kb on - strand at 125.736 kb on - strand at 125.737 kb on + strand at 125.738 kb on - strand at 125.797 kb on + strand at 125.844 kb on + strand at 125.899 kb on + strand at 125.899 kb on + strand at 125.899 kb on + strand at 125.899 kb on + strand at 125.900 kb on - strand at 125.937 kb on - strand at 126.045 kb on - strand, within H281DRAFT_02008 at 126.062 kb on + strand, within H281DRAFT_02008 at 126.100 kb on + strand, within H281DRAFT_02008 at 126.100 kb on + strand, within H281DRAFT_02008 at 126.100 kb on + strand, within H281DRAFT_02008 at 126.100 kb on + strand, within H281DRAFT_02008 at 126.101 kb on - strand, within H281DRAFT_02008 at 126.101 kb on - strand, within H281DRAFT_02008 at 126.101 kb on - strand, within H281DRAFT_02008 at 126.101 kb on - strand, within H281DRAFT_02008 at 126.101 kb on - strand, within H281DRAFT_02008 at 126.101 kb on - strand, within H281DRAFT_02008 at 126.164 kb on + strand at 126.206 kb on + strand at 126.206 kb on + strand at 126.207 kb on - strand at 126.207 kb on - strand at 126.240 kb on + strand at 126.241 kb on - strand at 126.241 kb on - strand at 126.241 kb on - strand at 126.244 kb on + strand at 126.245 kb on - strand at 126.245 kb on - strand at 126.245 kb on - strand at 126.245 kb on - strand at 126.245 kb on - strand at 126.684 kb on + strand, within H281DRAFT_02009 at 126.956 kb on + strand at 126.957 kb on - strand at 126.957 kb on - strand at 126.990 kb on + strand at 126.990 kb on + strand at 126.990 kb on + strand at 126.991 kb on - strand at 126.991 kb on - strand at 126.991 kb on - strand at 127.012 kb on - strand at 127.057 kb on + strand at 127.057 kb on + strand at 127.058 kb on - strand at 127.058 kb on - strand at 127.058 kb on - strand at 127.058 kb on - strand at 127.058 kb on - strand at 127.532 kb on - strand, within H281DRAFT_02010
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 125,294 + H281DRAFT_02007 0.79 +0.0 125,294 + H281DRAFT_02007 0.79 -0.8 125,366 + H281DRAFT_02007 0.83 -1.0 125,367 - H281DRAFT_02007 0.83 -0.8 125,434 + H281DRAFT_02007 0.87 -0.7 125,434 + H281DRAFT_02007 0.87 -0.9 125,434 + H281DRAFT_02007 0.87 -0.1 125,435 - H281DRAFT_02007 0.87 +0.3 125,435 - H281DRAFT_02007 0.87 -0.8 125,435 - H281DRAFT_02007 0.87 -0.5 125,574 - -1.2 125,574 - -0.3 125,581 + -1.0 125,581 + -0.3 125,581 + -0.9 125,582 - -1.0 125,609 + -0.8 125,609 + -0.9 125,609 + -0.9 125,609 + -0.7 125,610 - +0.2 125,610 - -0.4 125,629 - -0.5 125,680 + +0.6 125,680 + -0.7 125,680 + +0.8 125,680 + -0.2 125,681 - +0.3 125,681 - -0.9 125,681 - +0.0 125,736 - -0.3 125,737 + -0.2 125,738 - -0.0 125,797 + -0.6 125,844 + -0.0 125,899 + +0.5 125,899 + +0.9 125,899 + -1.6 125,899 + -0.9 125,900 - -0.1 125,937 - +0.1 126,045 - H281DRAFT_02008 0.48 -1.2 126,062 + H281DRAFT_02008 0.54 -2.1 126,100 + H281DRAFT_02008 0.68 -3.4 126,100 + H281DRAFT_02008 0.68 -0.9 126,100 + H281DRAFT_02008 0.68 -1.8 126,100 + H281DRAFT_02008 0.68 +0.1 126,101 - H281DRAFT_02008 0.69 -3.3 126,101 - H281DRAFT_02008 0.69 -1.5 126,101 - H281DRAFT_02008 0.69 -2.7 126,101 - H281DRAFT_02008 0.69 -2.4 126,101 - H281DRAFT_02008 0.69 -4.4 126,101 - H281DRAFT_02008 0.69 +0.5 126,164 + -3.3 126,206 + -0.9 126,206 + +0.1 126,207 - -1.5 126,207 - +0.1 126,240 + -0.5 126,241 - -0.1 126,241 - +0.5 126,241 - -0.1 126,244 + +0.6 126,245 - +1.0 126,245 - -0.2 126,245 - +0.4 126,245 - -1.1 126,245 - +0.0 126,684 + H281DRAFT_02009 0.85 -2.2 126,956 + -0.5 126,957 - +1.6 126,957 - +1.0 126,990 + +2.4 126,990 + +0.2 126,990 + +0.8 126,991 - -0.4 126,991 - -0.5 126,991 - -0.2 127,012 - +0.3 127,057 + +0.6 127,057 + -0.1 127,058 - -0.6 127,058 - +0.3 127,058 - -0.6 127,058 - -0.3 127,058 - +0.5 127,532 - H281DRAFT_02010 0.46 -1.3
Or see this region's nucleotide sequence