Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00560 and H281DRAFT_00561 are separated by 75 nucleotides H281DRAFT_00561 and H281DRAFT_00562 overlap by 1 nucleotides
H281DRAFT_00560: H281DRAFT_00560 - microcin C transport system substrate-binding protein, at 628,899 to 630,854
_00560
H281DRAFT_00561: H281DRAFT_00561 - microcin C transport system permease protein, at 630,930 to 631,967
_00561
H281DRAFT_00562: H281DRAFT_00562 - microcin C transport system permease protein, at 631,967 to 633,073
_00562
Position (kb) 630
631
632 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 630.066 kb on + strand, within H281DRAFT_00560 at 630.280 kb on - strand at 630.466 kb on - strand, within H281DRAFT_00560 at 630.712 kb on - strand at 630.775 kb on - strand at 630.777 kb on + strand at 630.778 kb on - strand at 630.778 kb on - strand at 630.778 kb on - strand at 630.894 kb on + strand at 630.901 kb on - strand at 630.939 kb on + strand at 630.940 kb on - strand at 631.221 kb on + strand, within H281DRAFT_00561 at 631.221 kb on + strand, within H281DRAFT_00561 at 631.221 kb on + strand, within H281DRAFT_00561 at 631.256 kb on - strand, within H281DRAFT_00561 at 631.289 kb on - strand, within H281DRAFT_00561 at 631.308 kb on + strand, within H281DRAFT_00561 at 631.390 kb on + strand, within H281DRAFT_00561 at 631.541 kb on - strand, within H281DRAFT_00561 at 631.712 kb on + strand, within H281DRAFT_00561 at 631.869 kb on + strand at 631.869 kb on + strand at 631.870 kb on - strand at 631.921 kb on - strand at 631.921 kb on - strand at 631.921 kb on - strand at 632.186 kb on + strand, within H281DRAFT_00562 at 632.207 kb on + strand, within H281DRAFT_00562 at 632.253 kb on - strand, within H281DRAFT_00562 at 632.321 kb on + strand, within H281DRAFT_00562 at 632.325 kb on - strand, within H281DRAFT_00562 at 632.327 kb on + strand, within H281DRAFT_00562 at 632.328 kb on - strand, within H281DRAFT_00562 at 632.328 kb on - strand, within H281DRAFT_00562 at 632.343 kb on - strand, within H281DRAFT_00562 at 632.591 kb on + strand, within H281DRAFT_00562 at 632.685 kb on - strand, within H281DRAFT_00562 at 632.685 kb on - strand, within H281DRAFT_00562 at 632.703 kb on + strand, within H281DRAFT_00562 at 632.797 kb on + strand, within H281DRAFT_00562 at 632.959 kb on + strand, within H281DRAFT_00562
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 630,066 + H281DRAFT_00560 0.60 +0.2 630,280 - +1.9 630,466 - H281DRAFT_00560 0.80 +0.1 630,712 - -1.2 630,775 - +1.0 630,777 + +0.3 630,778 - +1.6 630,778 - -2.0 630,778 - -0.6 630,894 + -0.3 630,901 - +0.1 630,939 + +3.8 630,940 - +0.3 631,221 + H281DRAFT_00561 0.28 +1.4 631,221 + H281DRAFT_00561 0.28 +1.8 631,221 + H281DRAFT_00561 0.28 +1.0 631,256 - H281DRAFT_00561 0.31 -0.3 631,289 - H281DRAFT_00561 0.35 +0.2 631,308 + H281DRAFT_00561 0.36 +0.3 631,390 + H281DRAFT_00561 0.44 +0.4 631,541 - H281DRAFT_00561 0.59 +0.4 631,712 + H281DRAFT_00561 0.75 +0.7 631,869 + -0.6 631,869 + +0.7 631,870 - +0.2 631,921 - -0.4 631,921 - +0.7 631,921 - +0.1 632,186 + H281DRAFT_00562 0.20 -0.1 632,207 + H281DRAFT_00562 0.22 -0.5 632,253 - H281DRAFT_00562 0.26 -0.5 632,321 + H281DRAFT_00562 0.32 -0.1 632,325 - H281DRAFT_00562 0.32 +1.2 632,327 + H281DRAFT_00562 0.33 +0.0 632,328 - H281DRAFT_00562 0.33 -3.6 632,328 - H281DRAFT_00562 0.33 -1.0 632,343 - H281DRAFT_00562 0.34 +0.6 632,591 + H281DRAFT_00562 0.56 +0.6 632,685 - H281DRAFT_00562 0.65 +1.3 632,685 - H281DRAFT_00562 0.65 +0.7 632,703 + H281DRAFT_00562 0.66 +1.4 632,797 + H281DRAFT_00562 0.75 +0.3 632,959 + H281DRAFT_00562 0.90 -0.5
Or see this region's nucleotide sequence