Experiment: spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3413 and Dsui_3414 are separated by 1 nucleotides Dsui_3414 and Dsui_3415 overlap by 4 nucleotides
Dsui_3413: Dsui_3413 - Fe-S oxidoreductase, at 3,665,253 to 3,666,515
_3413
Dsui_3414: Dsui_3414 - FAD/FMN-dependent dehydrogenase, at 3,666,517 to 3,667,617
_3414
Dsui_3415: Dsui_3415 - FAD/FMN-dependent dehydrogenase, at 3,667,614 to 3,669,074
_3415
Position (kb)
3666
3667
3668 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 3665.554 kb on + strand, within Dsui_3413 at 3665.562 kb on - strand, within Dsui_3413 at 3666.048 kb on + strand at 3666.102 kb on - strand, within Dsui_3413 at 3666.305 kb on - strand, within Dsui_3413 at 3666.369 kb on - strand, within Dsui_3413 at 3666.406 kb on - strand at 3666.435 kb on + strand at 3666.465 kb on - strand at 3666.524 kb on + strand at 3666.652 kb on + strand, within Dsui_3414 at 3666.727 kb on + strand, within Dsui_3414 at 3666.755 kb on - strand, within Dsui_3414 at 3666.819 kb on + strand, within Dsui_3414 at 3666.856 kb on - strand, within Dsui_3414 at 3666.922 kb on + strand, within Dsui_3414 at 3667.048 kb on + strand, within Dsui_3414 at 3667.055 kb on + strand, within Dsui_3414 at 3667.055 kb on + strand at 3667.069 kb on - strand, within Dsui_3414 at 3667.069 kb on - strand, within Dsui_3414 at 3667.106 kb on + strand at 3667.230 kb on - strand, within Dsui_3414 at 3667.237 kb on - strand, within Dsui_3414 at 3667.278 kb on - strand, within Dsui_3414 at 3667.378 kb on - strand, within Dsui_3414 at 3667.384 kb on - strand, within Dsui_3414 at 3667.419 kb on - strand, within Dsui_3414 at 3667.509 kb on - strand at 3667.564 kb on + strand at 3667.582 kb on - strand at 3667.679 kb on - strand at 3667.700 kb on + strand at 3667.708 kb on - strand at 3667.752 kb on - strand at 3667.752 kb on - strand at 3667.769 kb on - strand, within Dsui_3415 at 3667.820 kb on - strand, within Dsui_3415 at 3667.825 kb on - strand, within Dsui_3415 at 3667.829 kb on + strand, within Dsui_3415 at 3667.922 kb on - strand, within Dsui_3415 at 3667.934 kb on + strand, within Dsui_3415 at 3667.977 kb on + strand, within Dsui_3415 at 3668.007 kb on - strand, within Dsui_3415 at 3668.080 kb on + strand at 3668.088 kb on - strand, within Dsui_3415 at 3668.088 kb on - strand, within Dsui_3415 at 3668.137 kb on + strand, within Dsui_3415 at 3668.256 kb on - strand, within Dsui_3415 at 3668.341 kb on - strand, within Dsui_3415 at 3668.370 kb on - strand, within Dsui_3415 at 3668.385 kb on - strand, within Dsui_3415 at 3668.395 kb on - strand, within Dsui_3415 at 3668.522 kb on + strand, within Dsui_3415
Per-strain Table
Position Strand Gene LocusTag Fraction spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 3,665,554 + Dsui_3413 0.24 -0.3 3,665,562 - Dsui_3413 0.24 -1.8 3,666,048 + +1.8 3,666,102 - Dsui_3413 0.67 -0.3 3,666,305 - Dsui_3413 0.83 -0.4 3,666,369 - Dsui_3413 0.88 -1.4 3,666,406 - -2.4 3,666,435 + -2.8 3,666,465 - -0.3 3,666,524 + -0.1 3,666,652 + Dsui_3414 0.12 +0.9 3,666,727 + Dsui_3414 0.19 -0.5 3,666,755 - Dsui_3414 0.22 -2.4 3,666,819 + Dsui_3414 0.27 -1.9 3,666,856 - Dsui_3414 0.31 -3.0 3,666,922 + Dsui_3414 0.37 -1.9 3,667,048 + Dsui_3414 0.48 -1.6 3,667,055 + Dsui_3414 0.49 -1.3 3,667,055 + -2.0 3,667,069 - Dsui_3414 0.50 -2.0 3,667,069 - Dsui_3414 0.50 -1.4 3,667,106 + -2.2 3,667,230 - Dsui_3414 0.65 -3.2 3,667,237 - Dsui_3414 0.65 +1.0 3,667,278 - Dsui_3414 0.69 -1.3 3,667,378 - Dsui_3414 0.78 -1.7 3,667,384 - Dsui_3414 0.79 -3.1 3,667,419 - Dsui_3414 0.82 -1.4 3,667,509 - -0.7 3,667,564 + +0.2 3,667,582 - -2.5 3,667,679 - -3.1 3,667,700 + -2.9 3,667,708 - -1.1 3,667,752 - -1.4 3,667,752 - -3.5 3,667,769 - Dsui_3415 0.11 -1.0 3,667,820 - Dsui_3415 0.14 +0.4 3,667,825 - Dsui_3415 0.14 -3.2 3,667,829 + Dsui_3415 0.15 +0.3 3,667,922 - Dsui_3415 0.21 -1.5 3,667,934 + Dsui_3415 0.22 -2.7 3,667,977 + Dsui_3415 0.25 -5.4 3,668,007 - Dsui_3415 0.27 +0.2 3,668,080 + -1.4 3,668,088 - Dsui_3415 0.32 -3.0 3,668,088 - Dsui_3415 0.32 -2.7 3,668,137 + Dsui_3415 0.36 -2.8 3,668,256 - Dsui_3415 0.44 +1.0 3,668,341 - Dsui_3415 0.50 -0.1 3,668,370 - Dsui_3415 0.52 -1.8 3,668,385 - Dsui_3415 0.53 -3.6 3,668,395 - Dsui_3415 0.53 -0.9 3,668,522 + Dsui_3415 0.62 -0.2
Or see this region's nucleotide sequence