Strain Fitness in Dechlorosoma suillum PS around Dsui_3385

Experiment: spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3384 and Dsui_3385 are separated by 36 nucleotidesDsui_3385 and Dsui_3386 are separated by 196 nucleotidesDsui_3386 and Dsui_3387 overlap by 4 nucleotides Dsui_3384: Dsui_3384 - transporter, monovalent cation:proton antiporter-2 (CPA2) family, at 3,626,278 to 3,628,242 _3384 Dsui_3385: Dsui_3385 - Protein of unknown function (DUF1504), at 3,628,279 to 3,629,547 _3385 Dsui_3386: Dsui_3386 - response regulator, at 3,629,744 to 3,630,403 _3386 Dsui_3387: Dsui_3387 - histidine kinase,histidine kinase,MASE1-containing protein, at 3,630,400 to 3,632,037 _3387 Position (kb) 3628 3629 3630Strain fitness (log2 ratio) -1 0 1at 3627.323 kb on + strand, within Dsui_3384at 3627.391 kb on + strand, within Dsui_3384at 3627.422 kb on + strand, within Dsui_3384at 3627.519 kb on + strand, within Dsui_3384at 3627.653 kb on + strand, within Dsui_3384at 3627.672 kb on + strand, within Dsui_3384at 3627.910 kb on + strand, within Dsui_3384at 3627.910 kb on + strand, within Dsui_3384at 3627.920 kb on + strand, within Dsui_3384at 3627.959 kb on + strand, within Dsui_3384at 3628.012 kb on - strand, within Dsui_3384at 3628.012 kb on - strand, within Dsui_3384at 3628.012 kb on - strand, within Dsui_3384at 3628.012 kb on - strand, within Dsui_3384at 3628.159 kb on + strandat 3628.252 kb on - strandat 3629.553 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
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3,627,323 + Dsui_3384 0.53 +0.6
3,627,391 + Dsui_3384 0.57 -0.2
3,627,422 + Dsui_3384 0.58 +1.0
3,627,519 + Dsui_3384 0.63 +0.2
3,627,653 + Dsui_3384 0.70 +1.3
3,627,672 + Dsui_3384 0.71 +0.8
3,627,910 + Dsui_3384 0.83 +0.7
3,627,910 + Dsui_3384 0.83 +0.2
3,627,920 + Dsui_3384 0.84 +1.3
3,627,959 + Dsui_3384 0.86 +0.5
3,628,012 - Dsui_3384 0.88 +0.9
3,628,012 - Dsui_3384 0.88 +1.2
3,628,012 - Dsui_3384 0.88 -1.0
3,628,012 - Dsui_3384 0.88 +1.5
3,628,159 + +0.2
3,628,252 - +1.2
3,629,553 - -0.1

Or see this region's nucleotide sequence