Experiment: spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1986 and Dsui_1987 are separated by 24 nucleotides Dsui_1987 and Dsui_1988 are separated by 105 nucleotides Dsui_1988 and Dsui_1989 are separated by 135 nucleotides Dsui_1989 and Dsui_1990 are separated by 73 nucleotides Dsui_1990 and Dsui_1991 overlap by 35 nucleotides
Dsui_1986: Dsui_1986 - sulfite reductase, beta subunit (hemoprotein), at 2,094,974 to 2,096,650
_1986
Dsui_1987: Dsui_1987 - putative permease, at 2,096,675 to 2,097,448
_1987
Dsui_1988: Dsui_1988 - transcriptional regulator, at 2,097,554 to 2,098,528
_1988
Dsui_1989: Dsui_1989 - ribosomal protein S6, at 2,098,664 to 2,099,047
_1989
Dsui_1990: Dsui_1990 - primosomal replication protein N, at 2,099,121 to 2,099,411
_1990
Dsui_1991: Dsui_1991 - ribosomal protein S18, at 2,099,377 to 2,099,655
_1991
Position (kb)
2097
2098
2099 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2096.707 kb on - strand at 2096.785 kb on + strand at 2096.785 kb on + strand at 2096.871 kb on - strand, within Dsui_1987 at 2096.925 kb on - strand, within Dsui_1987 at 2096.925 kb on - strand, within Dsui_1987 at 2096.997 kb on - strand, within Dsui_1987 at 2096.997 kb on - strand, within Dsui_1987 at 2097.003 kb on - strand, within Dsui_1987 at 2097.063 kb on + strand at 2097.063 kb on + strand at 2097.069 kb on - strand, within Dsui_1987 at 2097.071 kb on - strand, within Dsui_1987 at 2097.191 kb on - strand, within Dsui_1987 at 2097.192 kb on - strand, within Dsui_1987 at 2097.276 kb on - strand, within Dsui_1987 at 2097.308 kb on - strand, within Dsui_1987 at 2097.325 kb on - strand, within Dsui_1987 at 2097.441 kb on - strand at 2098.522 kb on + strand at 2098.522 kb on + strand at 2098.522 kb on + strand at 2098.522 kb on + strand at 2098.522 kb on + strand at 2098.530 kb on - strand at 2098.530 kb on - strand at 2098.530 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 2,096,707 - +1.4 2,096,785 + +3.9 2,096,785 + -1.5 2,096,871 - Dsui_1987 0.25 +1.1 2,096,925 - Dsui_1987 0.32 +0.7 2,096,925 - Dsui_1987 0.32 +1.1 2,096,997 - Dsui_1987 0.42 +1.5 2,096,997 - Dsui_1987 0.42 -0.1 2,097,003 - Dsui_1987 0.42 +1.0 2,097,063 + -1.3 2,097,063 + -1.5 2,097,069 - Dsui_1987 0.51 +1.4 2,097,071 - Dsui_1987 0.51 +0.5 2,097,191 - Dsui_1987 0.67 +0.7 2,097,192 - Dsui_1987 0.67 +2.3 2,097,276 - Dsui_1987 0.78 +0.9 2,097,308 - Dsui_1987 0.82 +1.7 2,097,325 - Dsui_1987 0.84 +1.1 2,097,441 - +3.1 2,098,522 + -0.5 2,098,522 + +1.4 2,098,522 + +0.8 2,098,522 + +1.1 2,098,522 + +0.3 2,098,530 - -0.4 2,098,530 - -2.3 2,098,530 - -0.1
Or see this region's nucleotide sequence