Experiment: MoYLS4 with Antimycin A 0.2uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt potA and DVU0292 overlap by 16 nucleotides DVU0292 and DVU0293 are separated by 385 nucleotides
DVU0291: potA - ABC transporter, ATP-binding protein (TIGR), at 335,226 to 336,290
potA
DVU0292: DVU0292 - hypothetical protein (TIGR), at 336,275 to 337,381
DVU0292
DVU0293: DVU0293 - prokaryotic dksA/traR C4-type zinc finger family protein (TIGR), at 337,767 to 338,108
DVU0293
Position (kb) 336
337
338 Strain fitness (log2 ratio) -2
-1
0
1
2 at 335.293 kb on - strand at 335.347 kb on + strand, within potA at 335.366 kb on + strand, within potA at 335.394 kb on - strand, within potA at 335.408 kb on - strand, within potA at 335.460 kb on - strand, within potA at 335.482 kb on - strand, within potA at 335.484 kb on + strand, within potA at 335.560 kb on - strand, within potA at 335.672 kb on + strand, within potA at 335.680 kb on - strand, within potA at 335.708 kb on + strand, within potA at 335.716 kb on - strand, within potA at 335.787 kb on + strand, within potA at 335.833 kb on + strand, within potA at 335.854 kb on + strand, within potA at 335.885 kb on - strand, within potA at 335.900 kb on - strand, within potA at 335.943 kb on - strand, within potA at 335.962 kb on + strand, within potA at 335.962 kb on + strand, within potA at 336.005 kb on + strand, within potA at 336.033 kb on + strand, within potA at 336.153 kb on + strand, within potA at 336.158 kb on + strand, within potA at 336.159 kb on - strand, within potA at 336.232 kb on - strand at 336.264 kb on + strand at 336.264 kb on + strand at 336.264 kb on + strand at 336.272 kb on - strand at 336.288 kb on + strand at 336.310 kb on + strand at 336.335 kb on - strand at 336.386 kb on - strand, within DVU0292 at 336.403 kb on + strand, within DVU0292 at 336.510 kb on + strand, within DVU0292 at 336.650 kb on + strand, within DVU0292 at 336.650 kb on + strand, within DVU0292 at 336.658 kb on - strand, within DVU0292 at 336.686 kb on - strand, within DVU0292 at 336.822 kb on + strand, within DVU0292 at 336.822 kb on + strand, within DVU0292 at 336.822 kb on + strand, within DVU0292 at 336.830 kb on - strand, within DVU0292 at 336.844 kb on - strand, within DVU0292 at 336.861 kb on - strand, within DVU0292 at 336.873 kb on - strand, within DVU0292 at 336.900 kb on + strand, within DVU0292 at 336.908 kb on - strand, within DVU0292 at 336.968 kb on + strand, within DVU0292 at 337.025 kb on + strand, within DVU0292 at 337.025 kb on + strand, within DVU0292 at 337.028 kb on - strand, within DVU0292 at 337.152 kb on - strand, within DVU0292 at 337.208 kb on + strand, within DVU0292 at 337.237 kb on + strand, within DVU0292 at 337.317 kb on + strand at 337.355 kb on + strand at 337.421 kb on + strand at 337.421 kb on + strand at 337.423 kb on + strand at 337.423 kb on + strand at 337.423 kb on + strand at 337.423 kb on + strand at 337.431 kb on - strand at 337.431 kb on - strand at 337.431 kb on - strand at 337.517 kb on + strand at 337.524 kb on + strand at 337.525 kb on - strand at 337.771 kb on + strand at 337.784 kb on - strand at 337.796 kb on + strand at 337.885 kb on + strand, within DVU0293 at 337.949 kb on - strand, within DVU0293 at 338.026 kb on + strand, within DVU0293 at 338.071 kb on + strand, within DVU0293 at 338.186 kb on + strand at 338.194 kb on - strand at 338.276 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Antimycin A 0.2uM remove 335,293 - +0.9 335,347 + potA DVU0291 0.11 -1.1 335,366 + potA DVU0291 0.13 +0.1 335,394 - potA DVU0291 0.16 +0.3 335,408 - potA DVU0291 0.17 -0.5 335,460 - potA DVU0291 0.22 +0.4 335,482 - potA DVU0291 0.24 -0.2 335,484 + potA DVU0291 0.24 -1.1 335,560 - potA DVU0291 0.31 -0.5 335,672 + potA DVU0291 0.42 +0.1 335,680 - potA DVU0291 0.43 +0.0 335,708 + potA DVU0291 0.45 +0.3 335,716 - potA DVU0291 0.46 -0.3 335,787 + potA DVU0291 0.53 +0.2 335,833 + potA DVU0291 0.57 -1.0 335,854 + potA DVU0291 0.59 +0.2 335,885 - potA DVU0291 0.62 +0.5 335,900 - potA DVU0291 0.63 -0.3 335,943 - potA DVU0291 0.67 +0.2 335,962 + potA DVU0291 0.69 +0.1 335,962 + potA DVU0291 0.69 -0.9 336,005 + potA DVU0291 0.73 -0.3 336,033 + potA DVU0291 0.76 +0.3 336,153 + potA DVU0291 0.87 -1.6 336,158 + potA DVU0291 0.88 +0.3 336,159 - potA DVU0291 0.88 -1.1 336,232 - -1.0 336,264 + -0.2 336,264 + -1.5 336,264 + +0.4 336,272 - +1.0 336,288 + +0.0 336,310 + -0.6 336,335 - -0.1 336,386 - DVU0292 0.10 -1.5 336,403 + DVU0292 0.12 +0.9 336,510 + DVU0292 0.21 -0.6 336,650 + DVU0292 0.34 -0.8 336,650 + DVU0292 0.34 -0.9 336,658 - DVU0292 0.35 -2.5 336,686 - DVU0292 0.37 -2.2 336,822 + DVU0292 0.49 -0.3 336,822 + DVU0292 0.49 -0.8 336,822 + DVU0292 0.49 +0.0 336,830 - DVU0292 0.50 -0.7 336,844 - DVU0292 0.51 -1.5 336,861 - DVU0292 0.53 -1.6 336,873 - DVU0292 0.54 -0.5 336,900 + DVU0292 0.56 -1.1 336,908 - DVU0292 0.57 -1.5 336,968 + DVU0292 0.63 -0.4 337,025 + DVU0292 0.68 -0.0 337,025 + DVU0292 0.68 -0.3 337,028 - DVU0292 0.68 -0.2 337,152 - DVU0292 0.79 +0.9 337,208 + DVU0292 0.84 -0.0 337,237 + DVU0292 0.87 -0.4 337,317 + -0.0 337,355 + -0.6 337,421 + -1.6 337,421 + -0.2 337,423 + -0.3 337,423 + -0.1 337,423 + +0.3 337,423 + +0.5 337,431 - +0.6 337,431 - +0.2 337,431 - -0.4 337,517 + -1.3 337,524 + -0.4 337,525 - -0.6 337,771 + -0.0 337,784 - -0.4 337,796 + +2.1 337,885 + DVU0293 0.35 -0.3 337,949 - DVU0293 0.53 +0.2 338,026 + DVU0293 0.76 +0.0 338,071 + DVU0293 0.89 -0.8 338,186 + +0.2 338,194 - -0.2 338,276 + -0.4
Or see this region's nucleotide sequence