Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2309

Experiment: Cytidine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (C)
2,629,447	+				-2.1
2,629,448	-				+0.2
2,629,448	-				+1.8
2,629,448	-				+1.5
2,629,474	+				-0.3
2,629,474	+				+1.0
2,629,474	+				-0.3
2,629,474	+				+0.2
2,629,474	+				-1.1
2,629,474	+				+0.8
2,629,474	+				-1.2
2,629,475	-				+0.7
2,629,475	-				-0.8
2,629,475	-				-2.0
2,629,475	-				+2.6
2,629,475	-				-0.2
2,629,475	-				-0.2
2,629,475	-				-0.9
2,629,475	-				+0.2
2,629,478	+				+0.7
2,629,478	+				+1.2
2,629,478	+				-1.3
2,629,478	+				-0.2
2,629,478	+				-0.8
2,629,478	+				-1.1
2,629,478	+				+0.2
2,629,478	+				+0.2
2,629,478	+				-2.3
2,629,478	+				+0.0
2,629,478	+				+0.2
2,629,478	+				+1.2
2,629,478	+				-0.2
2,629,479	-				-1.0
2,629,479	-				-0.1
2,629,479	-				+0.2
2,629,479	-				-0.1
2,629,479	-				+0.2
2,629,479	-				-0.3
2,629,479	-				-0.3
2,629,479	-				+1.2
2,629,479	-				+0.6
2,629,479	-				-0.2
2,629,479	-				-1.5
2,629,479	-				-0.6
2,629,479	-				-0.2
2,629,479	-				-2.3
2,629,479	-				+0.6
2,629,479	-				+0.2
2,629,479	-				-2.1
2,629,479	-				-0.3
2,629,479	-				+0.6
2,629,479	-				+0.8
2,629,479	-				+1.2
2,629,578	+		Pf1N1B4_2308	0.11	-1.0
2,629,578	+		Pf1N1B4_2308	0.11	+0.4
2,629,578	+		Pf1N1B4_2308	0.11	-2.3
2,629,578	+		Pf1N1B4_2308	0.11	+0.0
2,629,578	+		Pf1N1B4_2308	0.11	-0.9
2,629,578	+		Pf1N1B4_2308	0.11	+0.2
2,629,578	+		Pf1N1B4_2308	0.11	+0.8
2,629,578	+		Pf1N1B4_2308	0.11	-3.1
2,629,578	+		Pf1N1B4_2308	0.11	-0.3
2,629,578	+		Pf1N1B4_2308	0.11	-1.1
2,629,578	+		Pf1N1B4_2308	0.11	-0.3
2,629,579	-		Pf1N1B4_2308	0.12	+0.2
2,629,579	-		Pf1N1B4_2308	0.12	+1.1
2,629,579	-		Pf1N1B4_2308	0.12	+0.2
2,629,579	-		Pf1N1B4_2308	0.12	-0.8
2,629,579	-		Pf1N1B4_2308	0.12	-1.3
2,629,579	-		Pf1N1B4_2308	0.12	-1.1
2,629,579	-		Pf1N1B4_2308	0.12	-0.2
2,629,579	-		Pf1N1B4_2308	0.12	-0.6
2,629,579	-		Pf1N1B4_2308	0.12	-0.6
2,629,675	-		Pf1N1B4_2308	0.23	-0.2
2,629,675	-		Pf1N1B4_2308	0.23	+0.2
2,629,685	+		Pf1N1B4_2308	0.24	-0.8
2,629,685	+		Pf1N1B4_2308	0.24	-0.3
2,629,686	-		Pf1N1B4_2308	0.24	-1.8
2,629,797	-		Pf1N1B4_2308	0.37	+0.2
2,629,797	-		Pf1N1B4_2308	0.37	+0.2
2,629,890	+		Pf1N1B4_2308	0.47	-0.3
2,629,891	-		Pf1N1B4_2308	0.48	+0.2
2,629,891	-		Pf1N1B4_2308	0.48	-0.2
2,629,891	-		Pf1N1B4_2308	0.48	-2.1
2,629,950	+		Pf1N1B4_2308	0.54	+0.8
2,629,950	+		Pf1N1B4_2308	0.54	+0.6
2,629,950	+		Pf1N1B4_2308	0.54	-0.8
2,629,950	+		Pf1N1B4_2308	0.54	-1.1
2,629,951	-		Pf1N1B4_2308	0.54	-0.6
2,629,951	-		Pf1N1B4_2308	0.54	-0.9
2,629,951	-		Pf1N1B4_2308	0.54	-0.3
2,629,974	+		Pf1N1B4_2308	0.57	+1.2
2,629,975	-		Pf1N1B4_2308	0.57	+0.2
2,629,975	-		Pf1N1B4_2308	0.57	-0.6
2,630,026	-		Pf1N1B4_2308	0.63	-0.6
2,630,055	+		Pf1N1B4_2308	0.66	-2.6
2,630,055	+		Pf1N1B4_2308	0.66	-0.6
2,630,055	+		Pf1N1B4_2308	0.66	+1.2
2,630,055	+		Pf1N1B4_2308	0.66	-0.3
2,630,055	+		Pf1N1B4_2308	0.66	-1.1
2,630,055	+		Pf1N1B4_2308	0.66	-0.1
2,630,056	-		Pf1N1B4_2308	0.67	-0.2
2,630,056	-		Pf1N1B4_2308	0.67	+0.4
2,630,056	-		Pf1N1B4_2308	0.67	-1.3
2,630,056	-		Pf1N1B4_2308	0.67	+1.2
2,630,056	-		Pf1N1B4_2308	0.67	-0.3
2,630,056	-		Pf1N1B4_2308	0.67	-1.3
2,630,056	-		Pf1N1B4_2308	0.67	-0.8
2,630,277	+				-0.8
2,630,277	+				-0.3
2,630,277	+				-0.2
2,630,278	-				+0.5
2,630,550	+		Pf1N1B4_2309	0.21	-1.6
2,630,550	+		Pf1N1B4_2309	0.21	+0.2
2,630,550	+		Pf1N1B4_2309	0.21	-0.1
2,630,551	-		Pf1N1B4_2309	0.22	+0.2
2,630,551	-		Pf1N1B4_2309	0.22	+3.1
2,630,551	-		Pf1N1B4_2309	0.22	+0.6
2,630,551	-		Pf1N1B4_2309	0.22	+1.1
2,630,551	-		Pf1N1B4_2309	0.22	+0.2
2,630,551	-		Pf1N1B4_2309	0.22	-0.3
2,630,692	-		Pf1N1B4_2309	0.39	+0.2
2,630,788	+		Pf1N1B4_2309	0.51	+1.0
2,630,788	+		Pf1N1B4_2309	0.51	+0.2
2,630,788	+		Pf1N1B4_2309	0.51	-0.3
2,630,788	+		Pf1N1B4_2309	0.51	+0.7
2,630,788	+		Pf1N1B4_2309	0.51	+1.2
2,630,788	+		Pf1N1B4_2309	0.51	-0.9
2,630,789	-		Pf1N1B4_2309	0.51	+0.7
2,630,789	-				+0.2
2,630,789	-		Pf1N1B4_2309	0.51	-0.8
2,630,839	+		Pf1N1B4_2309	0.57	+1.2
2,630,885	+		Pf1N1B4_2309	0.63	-0.3
2,630,885	+		Pf1N1B4_2309	0.63	+0.2
2,630,885	+		Pf1N1B4_2309	0.63	-0.9
2,630,885	+		Pf1N1B4_2309	0.63	+1.0
2,630,885	+		Pf1N1B4_2309	0.63	+1.8
2,630,890	-		Pf1N1B4_2309	0.63	-2.1
2,630,961	+		Pf1N1B4_2309	0.72	-0.0
2,630,962	-		Pf1N1B4_2309	0.72	-2.1
2,631,063	+		Pf1N1B4_2309	0.85	-2.6
2,631,079	+		Pf1N1B4_2309	0.86	+1.1
2,631,079	+		Pf1N1B4_2309	0.86	-0.8
2,631,079	+		Pf1N1B4_2309	0.86	-0.3
2,631,079	+		Pf1N1B4_2309	0.86	-0.3
2,631,079	+		Pf1N1B4_2309	0.86	+1.5
2,631,079	+		Pf1N1B4_2309	0.86	+1.2
2,631,079	+		Pf1N1B4_2309	0.86	-0.8
2,631,079	+		Pf1N1B4_2309	0.86	-0.3
2,631,079	+		Pf1N1B4_2309	0.86	-1.1
2,631,080	-		Pf1N1B4_2309	0.87	+0.8
2,631,080	-		Pf1N1B4_2309	0.87	-0.3
2,631,080	-		Pf1N1B4_2309	0.87	+1.2
2,631,080	-		Pf1N1B4_2309	0.87	-0.4
2,631,080	-		Pf1N1B4_2309	0.87	+0.8
2,631,080	-		Pf1N1B4_2309	0.87	-0.5
2,631,080	-		Pf1N1B4_2309	0.87	+0.5
2,631,087	+				+0.2
2,631,087	+		Pf1N1B4_2309	0.87	-1.3
2,631,196	+				+1.2
2,631,203	+				-1.3
2,631,203	+				-0.3
2,631,203	+				-2.1
2,631,203	+				+2.2
2,631,203	+				+0.6
2,631,203	+				+0.2
2,631,203	+				+0.1
2,631,204	-				-0.3
2,631,204	-				-0.8
2,631,204	-				+0.2
2,631,204	-				+0.5
2,631,204	-				-0.3
2,631,204	-				-0.2
2,631,205	+				+0.2
2,631,205	+				-0.1
2,631,571	+				-0.3
2,631,571	+				-0.6
2,631,571	+				+1.2
2,631,571	+				-1.3
2,631,571	+				-1.1
2,631,571	+				+1.8
2,631,599	+				-0.8
2,631,600	-				+1.7
2,631,600	-				-0.0
2,631,689	+				+0.2
2,631,707	-		Pf1N1B4_2311	0.10	+0.2
2,631,707	-		Pf1N1B4_2311	0.10	+0.7
2,631,936	-				-0.0
2,631,969	-				+0.4
2,632,056	-				-1.3
2,632,082	+				-0.8
2,632,082	+				-1.3
2,632,089	+				-0.5