Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1384

Experiment: Cytidine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (C)
1,582,890	+		Pf1N1B4_1383	0.40	-0.4
1,582,891	-		Pf1N1B4_1383	0.40	-0.4
1,582,891	-		Pf1N1B4_1383	0.40	-1.4
1,582,891	-		Pf1N1B4_1383	0.40	+0.9
1,582,891	-		Pf1N1B4_1383	0.40	+0.3
1,582,891	-		Pf1N1B4_1383	0.40	+0.6
1,582,891	-		Pf1N1B4_1383	0.40	+1.8
1,582,893	+		Pf1N1B4_1383	0.40	-0.8
1,582,893	+		Pf1N1B4_1383	0.40	-0.3
1,582,893	+		Pf1N1B4_1383	0.40	-0.4
1,582,893	+		Pf1N1B4_1383	0.40	-0.1
1,582,894	-		Pf1N1B4_1383	0.41	+0.2
1,582,894	-		Pf1N1B4_1383	0.41	-1.4
1,582,894	-		Pf1N1B4_1383	0.41	-0.6
1,582,894	-		Pf1N1B4_1383	0.41	+0.2
1,582,894	-		Pf1N1B4_1383	0.41	+0.8
1,582,894	-		Pf1N1B4_1383	0.41	+0.5
1,582,894	-		Pf1N1B4_1383	0.41	-0.8
1,582,896	+		Pf1N1B4_1383	0.41	-0.8
1,582,897	-		Pf1N1B4_1383	0.41	+0.2
1,582,944	+		Pf1N1B4_1383	0.44	+0.2
1,583,100	+		Pf1N1B4_1383	0.57	-0.1
1,583,100	+		Pf1N1B4_1383	0.57	-0.1
1,583,101	-		Pf1N1B4_1383	0.57	-0.2
1,583,316	+		Pf1N1B4_1383	0.73	-0.4
1,583,316	+		Pf1N1B4_1383	0.73	-0.8
1,583,316	+		Pf1N1B4_1383	0.73	-0.4
1,583,317	-		Pf1N1B4_1383	0.74	-0.8
1,583,317	-		Pf1N1B4_1383	0.74	+0.3
1,583,317	-		Pf1N1B4_1383	0.74	-1.0
1,583,317	-		Pf1N1B4_1383	0.74	-1.4
1,583,317	-		Pf1N1B4_1383	0.74	-0.9
1,583,317	-		Pf1N1B4_1383	0.74	-0.8
1,583,320	+		Pf1N1B4_1383	0.74	-1.8
1,583,506	+		Pf1N1B4_1383	0.88	-1.4
1,583,506	+		Pf1N1B4_1383	0.88	+2.0
1,583,507	-		Pf1N1B4_1383	0.88	+0.8
1,583,507	-		Pf1N1B4_1383	0.88	-0.2
1,583,507	-		Pf1N1B4_1383	0.88	+0.9
1,583,507	-		Pf1N1B4_1383	0.88	+1.2
1,583,679	+				+0.4
1,583,680	-				-0.8
1,583,680	-				+0.2
1,583,680	-				+0.2
1,583,680	-				-0.8
1,583,693	+				-0.4
1,583,693	+				-2.1
1,583,694	-				+0.9
1,583,694	-				-0.8
1,583,694	-				-1.0
1,583,694	-				-0.6
1,583,694	-				-1.8
1,583,732	+				+0.2
1,583,732	+				+1.2
1,583,733	-				+0.2
1,583,733	-				-1.0
1,583,757	+				-0.4
1,583,757	+				-0.4
1,583,757	+				-0.8
1,583,757	+				-0.6
1,583,758	-				-0.8
1,583,758	-				+1.2
1,583,758	-				-0.8
1,583,758	-				-0.0
1,583,758	-				+0.8
1,583,789	+				-2.0
1,583,789	+				-0.6
1,583,789	+				-1.4
1,583,789	+				+1.8
1,583,789	+				+0.2
1,583,790	-				-0.1
1,583,790	-				+0.9
1,583,790	-				+1.1
1,583,790	-				+0.9
1,583,790	-				-0.4
1,583,790	-				-0.8
1,583,790	-				-1.8
1,583,820	-				+0.2
1,583,820	-				-0.8
1,584,065	+		Pf1N1B4_1384	0.21	+0.6
1,584,065	+		Pf1N1B4_1384	0.21	+0.8
1,584,066	-		Pf1N1B4_1384	0.21	+2.0
1,584,066	-		Pf1N1B4_1384	0.21	+0.6
1,584,066	-		Pf1N1B4_1384	0.21	+0.2
1,584,140	+		Pf1N1B4_1384	0.26	-0.1
1,584,140	+		Pf1N1B4_1384	0.26	-0.3
1,584,140	+		Pf1N1B4_1384	0.26	-1.1
1,584,141	-		Pf1N1B4_1384	0.26	-1.8
1,584,141	-		Pf1N1B4_1384	0.26	-1.3
1,584,141	-		Pf1N1B4_1384	0.26	-2.6
1,584,141	-		Pf1N1B4_1384	0.26	+1.2
1,584,141	-		Pf1N1B4_1384	0.26	-1.1
1,584,141	-		Pf1N1B4_1384	0.26	+0.4
1,584,143	+		Pf1N1B4_1384	0.27	-0.8
1,584,144	-		Pf1N1B4_1384	0.27	+0.2
1,584,144	-		Pf1N1B4_1384	0.27	+0.9
1,584,309	-		Pf1N1B4_1384	0.38	-0.5
1,584,309	-		Pf1N1B4_1384	0.38	+0.2
1,584,493	-		Pf1N1B4_1384	0.50	-0.3
1,584,878	+		Pf1N1B4_1384	0.76	-0.8
1,585,190	+				-0.8
1,585,300	+				-0.8
1,585,300	+				-3.0
1,585,301	-				+0.9
1,585,340	-				-0.4
1,585,348	+				+0.9
1,585,349	-				+0.2
1,585,430	-				+0.5
1,585,436	+				-0.8
1,585,437	-				-0.4
1,585,631	+		Pf1N1B4_1385	0.23	-3.1
1,585,631	+		Pf1N1B4_1385	0.23	+0.8
1,585,632	-		Pf1N1B4_1385	0.23	-0.8
1,585,632	-		Pf1N1B4_1385	0.23	+0.5
1,585,632	-		Pf1N1B4_1385	0.23	+0.7
1,585,632	-		Pf1N1B4_1385	0.23	-0.2
1,585,632	-		Pf1N1B4_1385	0.23	-0.4
1,585,682	+		Pf1N1B4_1385	0.29	+0.5
1,585,682	+		Pf1N1B4_1385	0.29	-1.8
1,585,683	-		Pf1N1B4_1385	0.29	+0.2
1,585,683	-		Pf1N1B4_1385	0.29	-0.4
1,585,687	-		Pf1N1B4_1385	0.29	-0.1
1,585,687	-		Pf1N1B4_1385	0.29	+0.3
1,585,687	-		Pf1N1B4_1385	0.29	-2.1
1,585,865	+		Pf1N1B4_1385	0.49	+0.2
1,585,865	+		Pf1N1B4_1385	0.49	+2.2
1,585,866	-				+1.2
1,585,866	-		Pf1N1B4_1385	0.49	+0.2
1,585,866	-		Pf1N1B4_1385	0.49	-0.7
1,585,976	-		Pf1N1B4_1385	0.61	-0.2
1,586,055	-		Pf1N1B4_1385	0.70	+1.0
1,586,072	+		Pf1N1B4_1385	0.71	-0.7
1,586,072	+		Pf1N1B4_1385	0.71	-0.4
1,586,072	+		Pf1N1B4_1385	0.71	-1.1
1,586,073	-		Pf1N1B4_1385	0.71	-0.8
1,586,099	+		Pf1N1B4_1385	0.74	-0.1
1,586,099	+		Pf1N1B4_1385	0.74	-0.2
1,586,099	+		Pf1N1B4_1385	0.74	-0.8
1,586,099	+		Pf1N1B4_1385	0.74	-1.7
1,586,099	+		Pf1N1B4_1385	0.74	-0.4
1,586,099	+		Pf1N1B4_1385	0.74	+0.2
1,586,100	-		Pf1N1B4_1385	0.74	+0.4
1,586,100	-		Pf1N1B4_1385	0.74	-0.2
1,586,100	-		Pf1N1B4_1385	0.74	-0.0
1,586,100	-		Pf1N1B4_1385	0.74	-0.4
1,586,100	-		Pf1N1B4_1385	0.74	-1.1
1,586,100	-		Pf1N1B4_1385	0.74	+0.9
1,586,100	-		Pf1N1B4_1385	0.74	+1.2
1,586,100	-		Pf1N1B4_1385	0.74	+0.2
1,586,100	-		Pf1N1B4_1385	0.74	+0.8
1,586,100	-		Pf1N1B4_1385	0.74	+0.2
1,586,100	-		Pf1N1B4_1385	0.74	-0.1
1,586,100	-		Pf1N1B4_1385	0.74	+0.6
1,586,100	-		Pf1N1B4_1385	0.74	+1.4
1,586,100	-		Pf1N1B4_1385	0.74	-0.4
1,586,228	+		Pf1N1B4_1385	0.88	-0.2
1,586,228	+		Pf1N1B4_1385	0.88	+1.2
1,586,228	+		Pf1N1B4_1385	0.88	-0.4
1,586,229	-		Pf1N1B4_1385	0.89	+0.5
1,586,231	+		Pf1N1B4_1385	0.89	-1.4
1,586,231	+		Pf1N1B4_1385	0.89	-1.6
1,586,232	-		Pf1N1B4_1385	0.89	-0.5