Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06579 and H281DRAFT_06580 are separated by 15 nucleotides H281DRAFT_06580 and H281DRAFT_06581 are separated by 121 nucleotides H281DRAFT_06581 and H281DRAFT_06582 are separated by 111 nucleotides
H281DRAFT_06579: H281DRAFT_06579 - Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase), at 20,673 to 21,695
_06579
H281DRAFT_06580: H281DRAFT_06580 - DNA-binding transcriptional regulator, LysR family, at 21,711 to 22,622
_06580
H281DRAFT_06581: H281DRAFT_06581 - NADP-dependent 3-hydroxy acid dehydrogenase YdfG, at 22,744 to 23,475
_06581
H281DRAFT_06582: H281DRAFT_06582 - Predicted arabinose efflux permease, MFS family, at 23,587 to 24,831
_06582
Position (kb) 21
22
23 Strain fitness (log2 ratio) -2
-1
0
1
2 at 20.937 kb on + strand, within H281DRAFT_06579 at 20.937 kb on + strand, within H281DRAFT_06579 at 20.937 kb on + strand, within H281DRAFT_06579 at 20.937 kb on + strand, within H281DRAFT_06579 at 20.937 kb on + strand, within H281DRAFT_06579 at 20.937 kb on + strand, within H281DRAFT_06579 at 20.937 kb on + strand, within H281DRAFT_06579 at 20.938 kb on - strand, within H281DRAFT_06579 at 21.040 kb on - strand, within H281DRAFT_06579 at 21.108 kb on + strand, within H281DRAFT_06579 at 21.109 kb on - strand, within H281DRAFT_06579 at 21.109 kb on - strand, within H281DRAFT_06579 at 21.450 kb on + strand, within H281DRAFT_06579 at 21.451 kb on - strand, within H281DRAFT_06579 at 21.528 kb on + strand, within H281DRAFT_06579 at 21.633 kb on + strand at 21.939 kb on + strand, within H281DRAFT_06580 at 21.940 kb on - strand, within H281DRAFT_06580 at 21.940 kb on - strand, within H281DRAFT_06580 at 21.978 kb on + strand, within H281DRAFT_06580 at 22.103 kb on - strand, within H281DRAFT_06580 at 22.238 kb on - strand, within H281DRAFT_06580 at 22.332 kb on + strand, within H281DRAFT_06580 at 22.333 kb on - strand, within H281DRAFT_06580 at 22.384 kb on + strand, within H281DRAFT_06580 at 22.396 kb on - strand, within H281DRAFT_06580 at 22.667 kb on - strand at 22.667 kb on - strand at 22.667 kb on - strand at 22.730 kb on - strand at 22.967 kb on + strand, within H281DRAFT_06581 at 23.359 kb on + strand, within H281DRAFT_06581 at 23.360 kb on - strand, within H281DRAFT_06581
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 20,937 + H281DRAFT_06579 0.26 -0.1 20,937 + H281DRAFT_06579 0.26 -0.8 20,937 + H281DRAFT_06579 0.26 -1.1 20,937 + H281DRAFT_06579 0.26 +0.0 20,937 + H281DRAFT_06579 0.26 +0.0 20,937 + H281DRAFT_06579 0.26 -0.2 20,937 + H281DRAFT_06579 0.26 +0.6 20,938 - H281DRAFT_06579 0.26 +0.0 21,040 - H281DRAFT_06579 0.36 -0.3 21,108 + H281DRAFT_06579 0.43 +0.3 21,109 - H281DRAFT_06579 0.43 -0.5 21,109 - H281DRAFT_06579 0.43 +1.2 21,450 + H281DRAFT_06579 0.76 -0.1 21,451 - H281DRAFT_06579 0.76 +0.5 21,528 + H281DRAFT_06579 0.84 +1.1 21,633 + +0.3 21,939 + H281DRAFT_06580 0.25 -0.7 21,940 - H281DRAFT_06580 0.25 +0.7 21,940 - H281DRAFT_06580 0.25 -0.5 21,978 + H281DRAFT_06580 0.29 -0.5 22,103 - H281DRAFT_06580 0.43 +1.0 22,238 - H281DRAFT_06580 0.58 -0.4 22,332 + H281DRAFT_06580 0.68 -2.5 22,333 - H281DRAFT_06580 0.68 -0.1 22,384 + H281DRAFT_06580 0.74 +0.4 22,396 - H281DRAFT_06580 0.75 +0.4 22,667 - +0.6 22,667 - -0.2 22,667 - +0.1 22,730 - -0.2 22,967 + H281DRAFT_06581 0.30 +1.9 23,359 + H281DRAFT_06581 0.84 +0.2 23,360 - H281DRAFT_06581 0.84 -0.4
Or see this region's nucleotide sequence