Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06447 and H281DRAFT_06448 are separated by 94 nucleotides
H281DRAFT_06447: H281DRAFT_06447 - protein PsiE, at 52,737 to 53,195
_06447
H281DRAFT_06448: H281DRAFT_06448 - transcriptional regulator, LysR family, at 53,290 to 54,207
_06448
Position (kb) 53
54
55 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 52.391 kb on + strand at 52.391 kb on + strand at 52.398 kb on + strand at 52.398 kb on + strand at 52.398 kb on + strand at 52.399 kb on - strand at 52.399 kb on - strand at 52.399 kb on - strand at 52.558 kb on + strand at 52.558 kb on + strand at 52.567 kb on + strand at 52.567 kb on + strand at 52.738 kb on + strand at 52.738 kb on + strand at 52.738 kb on + strand at 52.739 kb on - strand at 52.816 kb on - strand, within H281DRAFT_06447 at 52.816 kb on - strand, within H281DRAFT_06447 at 52.845 kb on + strand, within H281DRAFT_06447 at 52.846 kb on - strand, within H281DRAFT_06447 at 52.846 kb on - strand, within H281DRAFT_06447 at 52.859 kb on + strand, within H281DRAFT_06447 at 52.860 kb on - strand, within H281DRAFT_06447 at 52.863 kb on - strand, within H281DRAFT_06447 at 52.868 kb on + strand, within H281DRAFT_06447 at 52.931 kb on + strand, within H281DRAFT_06447 at 52.968 kb on + strand, within H281DRAFT_06447 at 52.973 kb on - strand, within H281DRAFT_06447 at 53.003 kb on - strand, within H281DRAFT_06447 at 53.004 kb on + strand, within H281DRAFT_06447 at 53.005 kb on - strand, within H281DRAFT_06447 at 53.005 kb on - strand, within H281DRAFT_06447 at 53.005 kb on - strand, within H281DRAFT_06447 at 53.019 kb on + strand, within H281DRAFT_06447 at 53.020 kb on - strand, within H281DRAFT_06447 at 53.130 kb on + strand, within H281DRAFT_06447 at 53.291 kb on + strand at 53.529 kb on - strand, within H281DRAFT_06448 at 53.672 kb on - strand, within H281DRAFT_06448 at 53.696 kb on + strand, within H281DRAFT_06448 at 53.747 kb on - strand, within H281DRAFT_06448 at 53.980 kb on + strand, within H281DRAFT_06448 at 53.981 kb on - strand, within H281DRAFT_06448 at 54.004 kb on - strand at 54.038 kb on + strand, within H281DRAFT_06448 at 54.039 kb on - strand, within H281DRAFT_06448 at 54.081 kb on - strand, within H281DRAFT_06448 at 54.081 kb on - strand, within H281DRAFT_06448 at 54.154 kb on - strand at 54.179 kb on + strand at 54.179 kb on + strand at 54.179 kb on + strand at 54.180 kb on - strand at 54.180 kb on - strand at 54.181 kb on + strand at 54.181 kb on + strand at 54.181 kb on + strand at 54.182 kb on - strand at 54.182 kb on - strand at 54.182 kb on - strand at 54.182 kb on - strand at 54.182 kb on - strand at 54.210 kb on + strand at 54.361 kb on + strand at 54.361 kb on + strand at 54.361 kb on + strand at 54.361 kb on + strand at 54.361 kb on + strand at 54.362 kb on - strand at 54.362 kb on - strand at 54.362 kb on - strand at 54.362 kb on - strand at 54.362 kb on - strand at 54.431 kb on + strand at 54.431 kb on + strand at 54.432 kb on - strand at 54.441 kb on + strand at 54.613 kb on - strand at 54.756 kb on - strand at 54.784 kb on + strand at 54.784 kb on + strand at 54.785 kb on - strand at 54.817 kb on + strand at 54.817 kb on + strand at 55.168 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 52,391 + -0.8 52,391 + -0.3 52,398 + -0.8 52,398 + -0.5 52,398 + +0.8 52,399 - +0.6 52,399 - +0.5 52,399 - -0.2 52,558 + +0.1 52,558 + +0.7 52,567 + +0.2 52,567 + +0.2 52,738 + +0.2 52,738 + +0.2 52,738 + +0.0 52,739 - -0.2 52,816 - H281DRAFT_06447 0.17 +0.3 52,816 - H281DRAFT_06447 0.17 -0.5 52,845 + H281DRAFT_06447 0.24 +0.0 52,846 - H281DRAFT_06447 0.24 -1.3 52,846 - H281DRAFT_06447 0.24 -0.3 52,859 + H281DRAFT_06447 0.27 -0.2 52,860 - H281DRAFT_06447 0.27 +0.4 52,863 - H281DRAFT_06447 0.27 -0.3 52,868 + H281DRAFT_06447 0.29 +0.0 52,931 + H281DRAFT_06447 0.42 +0.3 52,968 + H281DRAFT_06447 0.50 -0.1 52,973 - H281DRAFT_06447 0.51 -0.2 53,003 - H281DRAFT_06447 0.58 +0.7 53,004 + H281DRAFT_06447 0.58 +0.4 53,005 - H281DRAFT_06447 0.58 +0.4 53,005 - H281DRAFT_06447 0.58 -0.2 53,005 - H281DRAFT_06447 0.58 -0.1 53,019 + H281DRAFT_06447 0.61 -0.2 53,020 - H281DRAFT_06447 0.62 -0.1 53,130 + H281DRAFT_06447 0.86 -0.2 53,291 + +0.9 53,529 - H281DRAFT_06448 0.26 -0.1 53,672 - H281DRAFT_06448 0.42 -0.2 53,696 + H281DRAFT_06448 0.44 +0.5 53,747 - H281DRAFT_06448 0.50 +0.1 53,980 + H281DRAFT_06448 0.75 -0.3 53,981 - H281DRAFT_06448 0.75 +0.5 54,004 - +2.6 54,038 + H281DRAFT_06448 0.81 -0.3 54,039 - H281DRAFT_06448 0.82 +0.2 54,081 - H281DRAFT_06448 0.86 +0.1 54,081 - H281DRAFT_06448 0.86 -0.2 54,154 - -0.2 54,179 + +3.3 54,179 + +0.3 54,179 + -0.1 54,180 - -0.5 54,180 - -0.0 54,181 + -0.8 54,181 + +0.8 54,181 + +0.6 54,182 - +0.2 54,182 - +2.3 54,182 - +2.0 54,182 - +0.2 54,182 - -0.1 54,210 + +0.2 54,361 + -0.1 54,361 + -0.2 54,361 + -0.1 54,361 + +0.7 54,361 + -0.0 54,362 - +1.2 54,362 - +0.1 54,362 - +0.5 54,362 - +0.7 54,362 - -0.1 54,431 + +0.4 54,431 + -0.4 54,432 - -1.8 54,441 + +0.5 54,613 - +0.3 54,756 - -0.0 54,784 + +0.2 54,784 + +0.6 54,785 - -1.6 54,817 + +0.1 54,817 + -0.5 55,168 + +0.4
Or see this region's nucleotide sequence