Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06328 and H281DRAFT_06329 overlap by 44 nucleotides H281DRAFT_06329 and H281DRAFT_06330 overlap by 4 nucleotides H281DRAFT_06330 and H281DRAFT_06331 overlap by 4 nucleotides
H281DRAFT_06328: H281DRAFT_06328 - transcriptional regulator, propionate catabolism operon regulatory protein, at 863 to 3,052
_06328
H281DRAFT_06329: H281DRAFT_06329 - transcriptional regulator, AraC family, at 3,009 to 3,419
_06329
H281DRAFT_06330: H281DRAFT_06330 - sarcosine oxidase subunit beta, at 3,416 to 4,585
_06330
H281DRAFT_06331: H281DRAFT_06331 - NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, at 4,582 to 5,973
_06331
Position (kb) 3
4
5 Strain fitness (log2 ratio) -2
-1
0
1
2 at 2.490 kb on - strand, within H281DRAFT_06328 at 2.492 kb on + strand, within H281DRAFT_06328 at 2.574 kb on + strand, within H281DRAFT_06328 at 2.575 kb on - strand at 2.575 kb on - strand, within H281DRAFT_06328 at 2.675 kb on + strand, within H281DRAFT_06328 at 2.675 kb on + strand, within H281DRAFT_06328 at 2.769 kb on + strand, within H281DRAFT_06328 at 3.025 kb on - strand at 3.262 kb on + strand, within H281DRAFT_06329 at 3.262 kb on + strand, within H281DRAFT_06329 at 3.399 kb on - strand at 3.580 kb on - strand, within H281DRAFT_06330 at 3.876 kb on + strand, within H281DRAFT_06330 at 3.950 kb on - strand, within H281DRAFT_06330 at 4.001 kb on + strand, within H281DRAFT_06330 at 4.001 kb on + strand, within H281DRAFT_06330 at 4.297 kb on - strand, within H281DRAFT_06330 at 4.724 kb on + strand, within H281DRAFT_06331 at 4.725 kb on - strand, within H281DRAFT_06331 at 5.075 kb on + strand, within H281DRAFT_06331 at 5.225 kb on - strand, within H281DRAFT_06331 at 5.471 kb on + strand, within H281DRAFT_06331 at 5.471 kb on + strand, within H281DRAFT_06331 at 5.472 kb on - strand, within H281DRAFT_06331 at 5.489 kb on + strand, within H281DRAFT_06331 at 5.579 kb on + strand at 5.579 kb on + strand, within H281DRAFT_06331 at 5.579 kb on + strand, within H281DRAFT_06331 at 5.580 kb on - strand, within H281DRAFT_06331
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 2,490 - H281DRAFT_06328 0.74 -0.3 2,492 + H281DRAFT_06328 0.74 -0.1 2,574 + H281DRAFT_06328 0.78 -0.8 2,575 - +2.5 2,575 - H281DRAFT_06328 0.78 -2.1 2,675 + H281DRAFT_06328 0.83 -0.7 2,675 + H281DRAFT_06328 0.83 +1.0 2,769 + H281DRAFT_06328 0.87 +0.1 3,025 - -0.2 3,262 + H281DRAFT_06329 0.62 +0.5 3,262 + H281DRAFT_06329 0.62 +0.3 3,399 - +0.1 3,580 - H281DRAFT_06330 0.14 +0.8 3,876 + H281DRAFT_06330 0.39 -0.2 3,950 - H281DRAFT_06330 0.46 +0.3 4,001 + H281DRAFT_06330 0.50 -0.4 4,001 + H281DRAFT_06330 0.50 -0.7 4,297 - H281DRAFT_06330 0.75 +1.0 4,724 + H281DRAFT_06331 0.10 -0.5 4,725 - H281DRAFT_06331 0.10 +0.4 5,075 + H281DRAFT_06331 0.35 +0.6 5,225 - H281DRAFT_06331 0.46 +0.7 5,471 + H281DRAFT_06331 0.64 +0.8 5,471 + H281DRAFT_06331 0.64 +0.7 5,472 - H281DRAFT_06331 0.64 -0.1 5,489 + H281DRAFT_06331 0.65 -0.2 5,579 + -1.1 5,579 + H281DRAFT_06331 0.72 +1.2 5,579 + H281DRAFT_06331 0.72 -0.1 5,580 - H281DRAFT_06331 0.72 -0.2
Or see this region's nucleotide sequence