Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06206 and H281DRAFT_06207 are separated by 441 nucleotides H281DRAFT_06207 and H281DRAFT_06208 are separated by 340 nucleotides
H281DRAFT_06206: H281DRAFT_06206 - 2-methylcitrate dehydratase PrpD, at 97,733 to 99,223
_06206
H281DRAFT_06207: H281DRAFT_06207 - Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit, at 99,665 to 100,237
_06207
H281DRAFT_06208: H281DRAFT_06208 - Sugar phosphate permease, at 100,578 to 101,780
_06208
Position (kb) 99
100
101 Strain fitness (log2 ratio) -1
0
1
2
3 at 98.669 kb on + strand, within H281DRAFT_06206 at 98.669 kb on + strand, within H281DRAFT_06206 at 98.669 kb on + strand, within H281DRAFT_06206 at 98.669 kb on + strand, within H281DRAFT_06206 at 98.670 kb on - strand, within H281DRAFT_06206 at 98.670 kb on - strand, within H281DRAFT_06206 at 98.670 kb on - strand, within H281DRAFT_06206 at 98.775 kb on + strand, within H281DRAFT_06206 at 98.775 kb on + strand, within H281DRAFT_06206 at 98.776 kb on - strand, within H281DRAFT_06206 at 98.776 kb on - strand, within H281DRAFT_06206 at 98.776 kb on - strand, within H281DRAFT_06206 at 98.776 kb on - strand, within H281DRAFT_06206 at 98.776 kb on - strand at 98.852 kb on + strand at 98.852 kb on + strand, within H281DRAFT_06206 at 98.853 kb on - strand at 98.955 kb on + strand, within H281DRAFT_06206 at 98.955 kb on + strand, within H281DRAFT_06206 at 98.959 kb on + strand, within H281DRAFT_06206 at 98.960 kb on - strand, within H281DRAFT_06206 at 99.007 kb on + strand, within H281DRAFT_06206 at 99.008 kb on - strand, within H281DRAFT_06206 at 99.061 kb on + strand, within H281DRAFT_06206 at 99.061 kb on + strand, within H281DRAFT_06206 at 99.180 kb on + strand at 99.181 kb on - strand at 99.181 kb on - strand at 99.197 kb on - strand at 99.534 kb on - strand at 99.546 kb on + strand at 99.547 kb on - strand at 99.602 kb on + strand at 99.603 kb on - strand at 99.603 kb on - strand at 99.607 kb on + strand at 99.608 kb on - strand at 99.630 kb on - strand at 99.630 kb on - strand at 99.761 kb on + strand, within H281DRAFT_06207 at 99.762 kb on - strand, within H281DRAFT_06207 at 99.901 kb on + strand, within H281DRAFT_06207 at 99.904 kb on + strand, within H281DRAFT_06207 at 99.953 kb on - strand, within H281DRAFT_06207 at 99.973 kb on + strand, within H281DRAFT_06207 at 100.024 kb on + strand, within H281DRAFT_06207 at 100.025 kb on - strand, within H281DRAFT_06207 at 100.025 kb on - strand, within H281DRAFT_06207 at 100.025 kb on - strand, within H281DRAFT_06207 at 100.025 kb on - strand, within H281DRAFT_06207 at 100.025 kb on - strand, within H281DRAFT_06207 at 100.073 kb on + strand, within H281DRAFT_06207 at 100.074 kb on - strand, within H281DRAFT_06207 at 100.153 kb on - strand, within H281DRAFT_06207 at 100.153 kb on - strand, within H281DRAFT_06207 at 100.166 kb on + strand, within H281DRAFT_06207 at 100.166 kb on + strand, within H281DRAFT_06207 at 100.166 kb on + strand, within H281DRAFT_06207 at 100.176 kb on - strand, within H281DRAFT_06207 at 100.205 kb on + strand at 100.218 kb on + strand at 100.290 kb on - strand at 100.290 kb on - strand at 100.340 kb on + strand at 100.340 kb on + strand at 100.340 kb on + strand at 100.341 kb on - strand at 100.341 kb on - strand at 100.341 kb on - strand at 100.341 kb on - strand at 100.341 kb on - strand at 100.344 kb on + strand at 100.344 kb on + strand at 100.344 kb on + strand at 100.344 kb on + strand at 100.344 kb on + strand at 100.345 kb on - strand at 100.345 kb on - strand at 100.345 kb on - strand at 100.345 kb on - strand at 100.345 kb on - strand at 100.345 kb on - strand at 100.453 kb on + strand at 100.453 kb on + strand at 100.454 kb on - strand at 100.618 kb on + strand at 100.633 kb on + strand at 100.711 kb on + strand, within H281DRAFT_06208 at 100.823 kb on - strand, within H281DRAFT_06208 at 100.840 kb on + strand, within H281DRAFT_06208 at 100.898 kb on + strand, within H281DRAFT_06208 at 100.898 kb on + strand, within H281DRAFT_06208 at 100.898 kb on + strand, within H281DRAFT_06208 at 100.899 kb on - strand, within H281DRAFT_06208 at 100.900 kb on + strand, within H281DRAFT_06208 at 100.908 kb on - strand, within H281DRAFT_06208 at 100.908 kb on - strand, within H281DRAFT_06208 at 100.909 kb on + strand, within H281DRAFT_06208 at 100.910 kb on - strand, within H281DRAFT_06208 at 100.910 kb on - strand, within H281DRAFT_06208 at 100.929 kb on + strand, within H281DRAFT_06208 at 100.929 kb on + strand, within H281DRAFT_06208 at 100.930 kb on - strand, within H281DRAFT_06208 at 100.933 kb on + strand, within H281DRAFT_06208 at 101.021 kb on + strand, within H281DRAFT_06208 at 101.022 kb on - strand, within H281DRAFT_06208 at 101.023 kb on + strand, within H281DRAFT_06208 at 101.024 kb on - strand, within H281DRAFT_06208
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 98,669 + H281DRAFT_06206 0.63 +0.2 98,669 + H281DRAFT_06206 0.63 +0.3 98,669 + H281DRAFT_06206 0.63 +0.3 98,669 + H281DRAFT_06206 0.63 -0.0 98,670 - H281DRAFT_06206 0.63 +0.8 98,670 - H281DRAFT_06206 0.63 +0.1 98,670 - H281DRAFT_06206 0.63 +0.1 98,775 + H281DRAFT_06206 0.70 -0.5 98,775 + H281DRAFT_06206 0.70 +0.4 98,776 - H281DRAFT_06206 0.70 +0.6 98,776 - H281DRAFT_06206 0.70 +0.4 98,776 - H281DRAFT_06206 0.70 -0.5 98,776 - H281DRAFT_06206 0.70 +0.4 98,776 - -1.5 98,852 + +0.7 98,852 + H281DRAFT_06206 0.75 +0.5 98,853 - +0.0 98,955 + H281DRAFT_06206 0.82 -0.6 98,955 + H281DRAFT_06206 0.82 -0.2 98,959 + H281DRAFT_06206 0.82 +0.3 98,960 - H281DRAFT_06206 0.82 -0.2 99,007 + H281DRAFT_06206 0.85 -1.2 99,008 - H281DRAFT_06206 0.86 +0.5 99,061 + H281DRAFT_06206 0.89 +1.0 99,061 + H281DRAFT_06206 0.89 +0.5 99,180 + +0.0 99,181 - +0.9 99,181 - -0.2 99,197 - +0.6 99,534 - +0.6 99,546 + +1.5 99,547 - +1.0 99,602 + +0.8 99,603 - +0.7 99,603 - -0.7 99,607 + +0.5 99,608 - +1.0 99,630 - -0.4 99,630 - -0.2 99,761 + H281DRAFT_06207 0.17 +0.0 99,762 - H281DRAFT_06207 0.17 -0.2 99,901 + H281DRAFT_06207 0.41 -0.4 99,904 + H281DRAFT_06207 0.42 -0.4 99,953 - H281DRAFT_06207 0.50 +1.7 99,973 + H281DRAFT_06207 0.54 -0.3 100,024 + H281DRAFT_06207 0.63 -0.3 100,025 - H281DRAFT_06207 0.63 -0.2 100,025 - H281DRAFT_06207 0.63 -0.4 100,025 - H281DRAFT_06207 0.63 +0.1 100,025 - H281DRAFT_06207 0.63 +0.7 100,025 - H281DRAFT_06207 0.63 -0.5 100,073 + H281DRAFT_06207 0.71 +0.3 100,074 - H281DRAFT_06207 0.71 +0.1 100,153 - H281DRAFT_06207 0.85 -0.2 100,153 - H281DRAFT_06207 0.85 +0.5 100,166 + H281DRAFT_06207 0.87 +0.2 100,166 + H281DRAFT_06207 0.87 -0.4 100,166 + H281DRAFT_06207 0.87 -1.2 100,176 - H281DRAFT_06207 0.89 -0.1 100,205 + +0.2 100,218 + +0.7 100,290 - -0.3 100,290 - +0.5 100,340 + +0.3 100,340 + -0.5 100,340 + -1.5 100,341 - +0.1 100,341 - +0.6 100,341 - +0.1 100,341 - -0.2 100,341 - +2.8 100,344 + +0.8 100,344 + +0.4 100,344 + +0.2 100,344 + +0.2 100,344 + -0.5 100,345 - -0.0 100,345 - +1.2 100,345 - +0.5 100,345 - +0.6 100,345 - +0.1 100,345 - -0.6 100,453 + +0.3 100,453 + -0.0 100,454 - -0.3 100,618 + +0.1 100,633 + -1.4 100,711 + H281DRAFT_06208 0.11 +0.2 100,823 - H281DRAFT_06208 0.20 -0.0 100,840 + H281DRAFT_06208 0.22 +0.1 100,898 + H281DRAFT_06208 0.27 -0.8 100,898 + H281DRAFT_06208 0.27 -1.2 100,898 + H281DRAFT_06208 0.27 +0.8 100,899 - H281DRAFT_06208 0.27 -0.5 100,900 + H281DRAFT_06208 0.27 -0.2 100,908 - H281DRAFT_06208 0.27 -0.4 100,908 - H281DRAFT_06208 0.27 -0.3 100,909 + H281DRAFT_06208 0.28 +0.7 100,910 - H281DRAFT_06208 0.28 +0.4 100,910 - H281DRAFT_06208 0.28 -0.1 100,929 + H281DRAFT_06208 0.29 -0.2 100,929 + H281DRAFT_06208 0.29 -0.2 100,930 - H281DRAFT_06208 0.29 +0.5 100,933 + H281DRAFT_06208 0.30 -0.0 101,021 + H281DRAFT_06208 0.37 +0.6 101,022 - H281DRAFT_06208 0.37 +0.5 101,023 + H281DRAFT_06208 0.37 -0.1 101,024 - H281DRAFT_06208 0.37 +0.8
Or see this region's nucleotide sequence