Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06008 and H281DRAFT_06009 are separated by 269 nucleotides H281DRAFT_06009 and H281DRAFT_06010 are separated by 75 nucleotides H281DRAFT_06010 and H281DRAFT_06011 are separated by 234 nucleotides
H281DRAFT_06008: H281DRAFT_06008 - RNA polymerase, sigma 70 subunit, RpoD, at 8,993 to 11,227
_06008
H281DRAFT_06009: H281DRAFT_06009 - DNA primase, at 11,497 to 13,365
_06009
H281DRAFT_06010: H281DRAFT_06010 - hypothetical protein, at 13,441 to 13,887
_06010
H281DRAFT_06011: H281DRAFT_06011 - SSU ribosomal protein S21P, at 14,122 to 14,334
_06011
Position (kb) 11
12
13
14 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 10.551 kb on + strand, within H281DRAFT_06008 at 10.551 kb on + strand, within H281DRAFT_06008 at 10.551 kb on + strand, within H281DRAFT_06008 at 10.551 kb on + strand at 10.551 kb on + strand, within H281DRAFT_06008 at 10.698 kb on + strand, within H281DRAFT_06008 at 10.699 kb on - strand, within H281DRAFT_06008 at 11.013 kb on - strand at 11.103 kb on - strand at 11.192 kb on + strand at 11.287 kb on + strand at 11.287 kb on + strand at 11.287 kb on + strand at 11.325 kb on - strand at 11.392 kb on + strand at 11.467 kb on - strand at 11.470 kb on - strand at 11.471 kb on + strand at 11.471 kb on + strand at 11.472 kb on - strand at 11.498 kb on + strand at 11.498 kb on + strand at 11.499 kb on - strand at 13.623 kb on - strand, within H281DRAFT_06010 at 13.623 kb on - strand, within H281DRAFT_06010 at 13.623 kb on - strand, within H281DRAFT_06010 at 13.623 kb on - strand, within H281DRAFT_06010 at 13.858 kb on - strand at 13.889 kb on - strand at 13.889 kb on - strand at 13.889 kb on - strand at 14.223 kb on - strand, within H281DRAFT_06011
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 10,551 + H281DRAFT_06008 0.70 -4.5 10,551 + H281DRAFT_06008 0.70 -2.3 10,551 + H281DRAFT_06008 0.70 -2.6 10,551 + -0.0 10,551 + H281DRAFT_06008 0.70 -4.2 10,698 + H281DRAFT_06008 0.76 -3.7 10,699 - H281DRAFT_06008 0.76 -2.5 11,013 - -1.2 11,103 - -0.1 11,192 + -1.6 11,287 + -3.3 11,287 + -1.6 11,287 + -2.5 11,325 - +2.6 11,392 + -2.3 11,467 - +0.7 11,470 - +0.5 11,471 + -5.0 11,471 + -1.4 11,472 - +1.3 11,498 + -2.2 11,498 + -2.0 11,499 - +0.2 13,623 - H281DRAFT_06010 0.41 +0.9 13,623 - H281DRAFT_06010 0.41 +0.9 13,623 - H281DRAFT_06010 0.41 +0.8 13,623 - H281DRAFT_06010 0.41 +0.2 13,858 - -0.0 13,889 - +0.5 13,889 - +1.4 13,889 - -0.4 14,223 - H281DRAFT_06011 0.47 +0.8
Or see this region's nucleotide sequence