Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05997 and H281DRAFT_05998 are separated by 86 nucleotides H281DRAFT_05998 and H281DRAFT_05999 are separated by 158 nucleotides H281DRAFT_05999 and H281DRAFT_06000 are separated by 87 nucleotides
H281DRAFT_05997: H281DRAFT_05997 - succinate dehydrogenase subunit B, at 1 to 657
_05997
H281DRAFT_05998: H281DRAFT_05998 - hypothetical protein, at 744 to 1,064
_05998
H281DRAFT_05999: H281DRAFT_05999 - hypothetical protein, at 1,223 to 1,927
_05999
H281DRAFT_06000: H281DRAFT_06000 - transcriptional regulator, AraC family, at 2,015 to 2,806
_06000
Position (kb) 0
1
2 Strain fitness (log2 ratio) -1
0
1
2 at 0.283 kb on + strand, within H281DRAFT_05997 at 0.685 kb on - strand at 0.685 kb on - strand at 0.745 kb on + strand at 0.751 kb on + strand at 0.835 kb on + strand, within H281DRAFT_05998 at 0.836 kb on - strand, within H281DRAFT_05998 at 1.010 kb on - strand, within H281DRAFT_05998 at 1.010 kb on - strand, within H281DRAFT_05998 at 1.184 kb on + strand at 1.185 kb on - strand at 1.287 kb on - strand at 1.361 kb on + strand, within H281DRAFT_05999 at 1.361 kb on + strand, within H281DRAFT_05999 at 1.617 kb on + strand, within H281DRAFT_05999 at 1.617 kb on + strand, within H281DRAFT_05999 at 1.618 kb on - strand, within H281DRAFT_05999 at 1.618 kb on - strand at 1.739 kb on - strand, within H281DRAFT_05999 at 1.974 kb on - strand at 2.047 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 283 + H281DRAFT_05997 0.43 +1.6 685 - +0.3 685 - +1.0 745 + -0.6 751 + -0.3 835 + H281DRAFT_05998 0.28 -0.5 836 - H281DRAFT_05998 0.29 +2.2 1,010 - H281DRAFT_05998 0.83 +1.0 1,010 - H281DRAFT_05998 0.83 -0.7 1,184 + +0.7 1,185 - +0.3 1,287 - -0.3 1,361 + H281DRAFT_05999 0.20 -0.2 1,361 + H281DRAFT_05999 0.20 +0.2 1,617 + H281DRAFT_05999 0.56 +0.1 1,617 + H281DRAFT_05999 0.56 +0.7 1,618 - H281DRAFT_05999 0.56 +0.2 1,618 - +1.6 1,739 - H281DRAFT_05999 0.73 +1.2 1,974 - -0.1 2,047 - +0.6
Or see this region's nucleotide sequence