Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_05991

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_05990 and H281DRAFT_05991 are separated by 54 nucleotidesH281DRAFT_05991 and H281DRAFT_05992 are separated by 26 nucleotides H281DRAFT_05990: H281DRAFT_05990 - DNA-binding transcriptional regulator, LysR family, at 132,762 to 133,757 _05990 H281DRAFT_05991: H281DRAFT_05991 - Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase, at 133,812 to 135,200 _05991 H281DRAFT_05992: H281DRAFT_05992 - MFS transporter, MHS family, proline/betaine transporter, at 135,227 to 136,528 _05992 Position (kb) 133 134 135 136Strain fitness (log2 ratio) -1 0 1at 133.753 kb on + strandat 134.074 kb on + strand, within H281DRAFT_05991at 134.074 kb on + strand, within H281DRAFT_05991at 134.172 kb on + strand, within H281DRAFT_05991at 134.448 kb on - strand, within H281DRAFT_05991at 135.438 kb on - strand, within H281DRAFT_05992at 135.619 kb on + strand, within H281DRAFT_05992at 135.820 kb on + strand, within H281DRAFT_05992at 135.821 kb on - strand, within H281DRAFT_05992at 135.854 kb on + strand, within H281DRAFT_05992at 135.855 kb on - strand, within H281DRAFT_05992at 135.855 kb on - strand, within H281DRAFT_05992

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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133,753 + -0.5
134,074 + H281DRAFT_05991 0.19 +0.3
134,074 + H281DRAFT_05991 0.19 +0.8
134,172 + H281DRAFT_05991 0.26 +0.2
134,448 - H281DRAFT_05991 0.46 +0.3
135,438 - H281DRAFT_05992 0.16 -0.6
135,619 + H281DRAFT_05992 0.30 +0.4
135,820 + H281DRAFT_05992 0.46 +1.3
135,821 - H281DRAFT_05992 0.46 +1.0
135,854 + H281DRAFT_05992 0.48 +0.6
135,855 - H281DRAFT_05992 0.48 +0.7
135,855 - H281DRAFT_05992 0.48 -0.8

Or see this region's nucleotide sequence