Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05961 and H281DRAFT_05962 overlap by 1 nucleotides H281DRAFT_05962 and H281DRAFT_05963 are separated by 165 nucleotides H281DRAFT_05963 and H281DRAFT_05964 are separated by 164 nucleotides
H281DRAFT_05961: H281DRAFT_05961 - D-3-phosphoglycerate dehydrogenase, at 102,676 to 103,623
_05961
H281DRAFT_05962: H281DRAFT_05962 - RraA famliy, at 103,623 to 104,321
_05962
H281DRAFT_05963: H281DRAFT_05963 - transcriptional regulator, IclR family, at 104,487 to 105,197
_05963
H281DRAFT_05964: H281DRAFT_05964 - D-galactonate transporter, at 105,362 to 106,666
_05964
Position (kb) 104
105
106 Strain fitness (log2 ratio) -2
-1
0
1 at 103.792 kb on - strand, within H281DRAFT_05962 at 104.312 kb on + strand at 104.313 kb on - strand at 104.313 kb on - strand at 104.386 kb on - strand at 104.697 kb on + strand, within H281DRAFT_05963 at 104.697 kb on + strand, within H281DRAFT_05963 at 104.712 kb on + strand, within H281DRAFT_05963 at 104.712 kb on + strand, within H281DRAFT_05963 at 104.793 kb on + strand, within H281DRAFT_05963 at 104.796 kb on + strand, within H281DRAFT_05963 at 105.455 kb on - strand at 106.047 kb on + strand, within H281DRAFT_05964
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 103,792 - H281DRAFT_05962 0.24 -0.4 104,312 + -0.2 104,313 - -1.0 104,313 - +0.1 104,386 - -0.0 104,697 + H281DRAFT_05963 0.30 -1.1 104,697 + H281DRAFT_05963 0.30 -0.2 104,712 + H281DRAFT_05963 0.32 -1.0 104,712 + H281DRAFT_05963 0.32 -1.2 104,793 + H281DRAFT_05963 0.43 -1.8 104,796 + H281DRAFT_05963 0.43 -0.4 105,455 - -0.9 106,047 + H281DRAFT_05964 0.52 +0.4
Or see this region's nucleotide sequence