Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05898 and H281DRAFT_05899 are separated by 77 nucleotides H281DRAFT_05899 and H281DRAFT_05900 are separated by 154 nucleotides H281DRAFT_05900 and H281DRAFT_05901 are separated by 29 nucleotides H281DRAFT_05901 and H281DRAFT_05902 are separated by 151 nucleotides
H281DRAFT_05898: H281DRAFT_05898 - Short repeat of unknown function (DUF308), at 34,992 to 35,567
_05898
H281DRAFT_05899: H281DRAFT_05899 - hypothetical protein, at 35,645 to 36,259
_05899
H281DRAFT_05900: H281DRAFT_05900 - HD-GYP domain, at 36,414 to 37,904
_05900
H281DRAFT_05901: H281DRAFT_05901 - Cupin domain-containing protein, at 37,934 to 38,275
_05901
H281DRAFT_05902: H281DRAFT_05902 - 2-Methylisocitrate lyase, PEP mutase family, at 38,427 to 39,275
_05902
Position (kb) 36
37
38 Strain fitness (log2 ratio) -1
0
1 at 35.421 kb on + strand, within H281DRAFT_05898 at 35.541 kb on - strand at 35.620 kb on + strand at 35.621 kb on - strand at 35.624 kb on + strand at 35.697 kb on + strand at 35.698 kb on - strand at 35.829 kb on + strand, within H281DRAFT_05899 at 35.923 kb on - strand, within H281DRAFT_05899 at 36.021 kb on + strand, within H281DRAFT_05899 at 36.022 kb on - strand, within H281DRAFT_05899 at 36.263 kb on + strand at 36.264 kb on - strand at 36.274 kb on + strand at 36.275 kb on - strand at 36.294 kb on + strand at 36.295 kb on - strand at 36.382 kb on - strand at 36.382 kb on - strand at 36.461 kb on - strand at 36.919 kb on - strand, within H281DRAFT_05900 at 36.919 kb on - strand, within H281DRAFT_05900 at 36.923 kb on - strand, within H281DRAFT_05900 at 36.923 kb on - strand, within H281DRAFT_05900 at 36.963 kb on + strand, within H281DRAFT_05900 at 36.964 kb on - strand, within H281DRAFT_05900 at 37.522 kb on + strand, within H281DRAFT_05900 at 37.523 kb on - strand, within H281DRAFT_05900 at 37.523 kb on - strand, within H281DRAFT_05900 at 37.993 kb on - strand, within H281DRAFT_05901 at 37.993 kb on - strand at 38.123 kb on + strand, within H281DRAFT_05901 at 38.123 kb on + strand, within H281DRAFT_05901 at 38.530 kb on - strand, within H281DRAFT_05902
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 35,421 + H281DRAFT_05898 0.74 +0.5 35,541 - +0.3 35,620 + +0.1 35,621 - -0.4 35,624 + -0.1 35,697 + -0.1 35,698 - -1.0 35,829 + H281DRAFT_05899 0.30 -0.3 35,923 - H281DRAFT_05899 0.45 -0.4 36,021 + H281DRAFT_05899 0.61 -1.2 36,022 - H281DRAFT_05899 0.61 +0.6 36,263 + +0.4 36,264 - -0.1 36,274 + -0.7 36,275 - +0.1 36,294 + +0.3 36,295 - +0.6 36,382 - +0.2 36,382 - -0.1 36,461 - +0.3 36,919 - H281DRAFT_05900 0.34 +0.6 36,919 - H281DRAFT_05900 0.34 +0.6 36,923 - H281DRAFT_05900 0.34 +0.4 36,923 - H281DRAFT_05900 0.34 +0.5 36,963 + H281DRAFT_05900 0.37 +0.3 36,964 - H281DRAFT_05900 0.37 +0.0 37,522 + H281DRAFT_05900 0.74 -0.2 37,523 - H281DRAFT_05900 0.74 -1.0 37,523 - H281DRAFT_05900 0.74 +0.0 37,993 - H281DRAFT_05901 0.17 -0.2 37,993 - +0.7 38,123 + H281DRAFT_05901 0.55 +1.5 38,123 + H281DRAFT_05901 0.55 +1.3 38,530 - H281DRAFT_05902 0.12 -0.1
Or see this region's nucleotide sequence