Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05763 and H281DRAFT_05764 are separated by 10 nucleotides H281DRAFT_05764 and H281DRAFT_05765 are separated by 42 nucleotides H281DRAFT_05765 and H281DRAFT_05766 are separated by 20 nucleotides H281DRAFT_05766 and H281DRAFT_05767 are separated by 100 nucleotides
H281DRAFT_05763: H281DRAFT_05763 - flagellar basal-body rod protein FlgC, at 36,869 to 37,294
_05763
H281DRAFT_05764: H281DRAFT_05764 - flagellar basal-body rod modification protein FlgD, at 37,305 to 38,036
_05764
H281DRAFT_05765: H281DRAFT_05765 - flagellar hook protein FlgE, at 38,079 to 39,587
_05765
H281DRAFT_05766: H281DRAFT_05766 - flagellar basal-body rod protein FlgF, at 39,608 to 40,366
_05766
H281DRAFT_05767: H281DRAFT_05767 - flagellar basal-body rod protein FlgG, at 40,467 to 41,255
_05767
Position (kb) 38
39
40 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 37.157 kb on + strand, within H281DRAFT_05763 at 37.158 kb on - strand, within H281DRAFT_05763 at 37.365 kb on - strand at 37.872 kb on + strand, within H281DRAFT_05764 at 37.873 kb on - strand, within H281DRAFT_05764 at 37.970 kb on + strand at 37.970 kb on + strand at 38.035 kb on - strand at 38.053 kb on - strand at 38.163 kb on - strand at 38.163 kb on - strand at 38.205 kb on + strand at 38.206 kb on - strand at 38.206 kb on - strand at 38.480 kb on + strand, within H281DRAFT_05765 at 38.502 kb on - strand, within H281DRAFT_05765 at 38.688 kb on + strand, within H281DRAFT_05765 at 38.688 kb on + strand, within H281DRAFT_05765 at 38.688 kb on + strand, within H281DRAFT_05765 at 38.688 kb on + strand, within H281DRAFT_05765 at 38.688 kb on + strand, within H281DRAFT_05765 at 38.689 kb on - strand, within H281DRAFT_05765 at 38.689 kb on - strand, within H281DRAFT_05765 at 38.763 kb on + strand, within H281DRAFT_05765 at 38.763 kb on + strand, within H281DRAFT_05765 at 38.764 kb on - strand, within H281DRAFT_05765 at 38.764 kb on - strand, within H281DRAFT_05765 at 38.841 kb on + strand, within H281DRAFT_05765 at 38.841 kb on + strand, within H281DRAFT_05765 at 38.841 kb on + strand at 38.841 kb on + strand, within H281DRAFT_05765 at 38.841 kb on + strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.843 kb on + strand, within H281DRAFT_05765 at 38.844 kb on - strand, within H281DRAFT_05765 at 38.892 kb on + strand, within H281DRAFT_05765 at 38.893 kb on - strand, within H281DRAFT_05765 at 38.893 kb on - strand, within H281DRAFT_05765 at 38.898 kb on + strand, within H281DRAFT_05765 at 38.898 kb on + strand, within H281DRAFT_05765 at 38.919 kb on + strand, within H281DRAFT_05765 at 39.186 kb on + strand, within H281DRAFT_05765 at 39.289 kb on - strand, within H281DRAFT_05765 at 39.371 kb on + strand, within H281DRAFT_05765 at 39.522 kb on + strand at 39.523 kb on - strand at 39.523 kb on - strand at 39.523 kb on - strand at 39.623 kb on + strand at 39.920 kb on + strand, within H281DRAFT_05766 at 40.360 kb on + strand at 40.361 kb on - strand at 40.415 kb on + strand at 40.415 kb on + strand at 40.415 kb on + strand at 40.416 kb on - strand at 40.416 kb on - strand at 40.416 kb on - strand at 40.416 kb on - strand at 40.454 kb on + strand at 40.454 kb on + strand at 40.467 kb on - strand at 40.482 kb on + strand at 40.483 kb on - strand at 40.483 kb on - strand at 40.483 kb on - strand at 40.484 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 37,157 + H281DRAFT_05763 0.68 +0.7 37,158 - H281DRAFT_05763 0.68 +0.9 37,365 - +1.0 37,872 + H281DRAFT_05764 0.77 +0.7 37,873 - H281DRAFT_05764 0.78 +0.6 37,970 + +1.1 37,970 + +1.0 38,035 - +0.3 38,053 - +1.1 38,163 - +0.3 38,163 - +0.7 38,205 + +0.5 38,206 - +1.3 38,206 - +0.7 38,480 + H281DRAFT_05765 0.27 +2.4 38,502 - H281DRAFT_05765 0.28 +0.2 38,688 + H281DRAFT_05765 0.40 +1.0 38,688 + H281DRAFT_05765 0.40 +1.5 38,688 + H281DRAFT_05765 0.40 +2.0 38,688 + H281DRAFT_05765 0.40 +1.3 38,688 + H281DRAFT_05765 0.40 +1.1 38,689 - H281DRAFT_05765 0.40 +0.1 38,689 - H281DRAFT_05765 0.40 +0.8 38,763 + H281DRAFT_05765 0.45 +0.4 38,763 + H281DRAFT_05765 0.45 -0.1 38,764 - H281DRAFT_05765 0.45 +0.6 38,764 - H281DRAFT_05765 0.45 -0.1 38,841 + H281DRAFT_05765 0.50 +0.8 38,841 + H281DRAFT_05765 0.50 -0.1 38,841 + +3.0 38,841 + H281DRAFT_05765 0.50 +0.8 38,841 + H281DRAFT_05765 0.50 +0.6 38,842 - H281DRAFT_05765 0.51 +0.6 38,842 - H281DRAFT_05765 0.51 -0.5 38,842 - H281DRAFT_05765 0.51 +0.5 38,842 - H281DRAFT_05765 0.51 -0.1 38,842 - H281DRAFT_05765 0.51 +1.0 38,842 - H281DRAFT_05765 0.51 +0.3 38,842 - H281DRAFT_05765 0.51 -0.0 38,843 + H281DRAFT_05765 0.51 +0.2 38,844 - H281DRAFT_05765 0.51 +1.1 38,892 + H281DRAFT_05765 0.54 +1.3 38,893 - H281DRAFT_05765 0.54 +0.7 38,893 - H281DRAFT_05765 0.54 -0.4 38,898 + H281DRAFT_05765 0.54 -0.6 38,898 + H281DRAFT_05765 0.54 +1.0 38,919 + H281DRAFT_05765 0.56 +1.2 39,186 + H281DRAFT_05765 0.73 +1.0 39,289 - H281DRAFT_05765 0.80 +0.2 39,371 + H281DRAFT_05765 0.86 +0.6 39,522 + +0.5 39,523 - +0.9 39,523 - +1.1 39,523 - +1.3 39,623 + +1.1 39,920 + H281DRAFT_05766 0.41 +0.1 40,360 + +0.5 40,361 - +0.5 40,415 + -0.5 40,415 + +0.1 40,415 + +0.1 40,416 - +1.0 40,416 - +0.3 40,416 - +0.2 40,416 - +1.2 40,454 + +0.1 40,454 + +1.2 40,467 - -0.2 40,482 + +0.8 40,483 - -0.3 40,483 - -3.5 40,483 - +1.1 40,484 + +1.0
Or see this region's nucleotide sequence