Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05762 and H281DRAFT_05763 are separated by 102 nucleotides H281DRAFT_05763 and H281DRAFT_05764 are separated by 10 nucleotides H281DRAFT_05764 and H281DRAFT_05765 are separated by 42 nucleotides
H281DRAFT_05762: H281DRAFT_05762 - flagellar basal-body rod protein FlgB, at 36,275 to 36,766
_05762
H281DRAFT_05763: H281DRAFT_05763 - flagellar basal-body rod protein FlgC, at 36,869 to 37,294
_05763
H281DRAFT_05764: H281DRAFT_05764 - flagellar basal-body rod modification protein FlgD, at 37,305 to 38,036
_05764
H281DRAFT_05765: H281DRAFT_05765 - flagellar hook protein FlgE, at 38,079 to 39,587
_05765
Position (kb) 37
38
39 Strain fitness (log2 ratio) -1
0
1
2
3 at 36.387 kb on - strand, within H281DRAFT_05762 at 36.458 kb on - strand, within H281DRAFT_05762 at 36.652 kb on + strand, within H281DRAFT_05762 at 36.801 kb on + strand at 36.827 kb on + strand at 36.888 kb on + strand at 36.888 kb on + strand at 36.888 kb on + strand at 36.888 kb on + strand at 36.889 kb on - strand at 36.889 kb on - strand at 36.889 kb on - strand at 36.889 kb on - strand at 36.889 kb on - strand at 36.889 kb on - strand at 36.889 kb on - strand at 36.995 kb on + strand, within H281DRAFT_05763 at 36.996 kb on - strand, within H281DRAFT_05763 at 36.996 kb on - strand, within H281DRAFT_05763 at 36.996 kb on - strand, within H281DRAFT_05763 at 37.157 kb on + strand, within H281DRAFT_05763 at 37.158 kb on - strand, within H281DRAFT_05763 at 37.365 kb on - strand at 37.872 kb on + strand, within H281DRAFT_05764 at 37.873 kb on - strand, within H281DRAFT_05764 at 37.970 kb on + strand at 37.970 kb on + strand at 38.035 kb on - strand at 38.053 kb on - strand at 38.163 kb on - strand at 38.163 kb on - strand at 38.205 kb on + strand at 38.206 kb on - strand at 38.206 kb on - strand at 38.480 kb on + strand, within H281DRAFT_05765 at 38.502 kb on - strand, within H281DRAFT_05765 at 38.688 kb on + strand, within H281DRAFT_05765 at 38.688 kb on + strand, within H281DRAFT_05765 at 38.688 kb on + strand, within H281DRAFT_05765 at 38.688 kb on + strand, within H281DRAFT_05765 at 38.688 kb on + strand, within H281DRAFT_05765 at 38.689 kb on - strand, within H281DRAFT_05765 at 38.689 kb on - strand, within H281DRAFT_05765 at 38.763 kb on + strand, within H281DRAFT_05765 at 38.763 kb on + strand, within H281DRAFT_05765 at 38.764 kb on - strand, within H281DRAFT_05765 at 38.764 kb on - strand, within H281DRAFT_05765 at 38.841 kb on + strand, within H281DRAFT_05765 at 38.841 kb on + strand, within H281DRAFT_05765 at 38.841 kb on + strand at 38.841 kb on + strand, within H281DRAFT_05765 at 38.841 kb on + strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.843 kb on + strand, within H281DRAFT_05765 at 38.844 kb on - strand, within H281DRAFT_05765 at 38.892 kb on + strand, within H281DRAFT_05765 at 38.893 kb on - strand, within H281DRAFT_05765 at 38.893 kb on - strand, within H281DRAFT_05765 at 38.898 kb on + strand, within H281DRAFT_05765 at 38.898 kb on + strand, within H281DRAFT_05765 at 38.919 kb on + strand, within H281DRAFT_05765
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 36,387 - H281DRAFT_05762 0.23 +0.9 36,458 - H281DRAFT_05762 0.37 -0.1 36,652 + H281DRAFT_05762 0.77 +1.9 36,801 + +0.1 36,827 + +2.2 36,888 + +1.0 36,888 + +0.4 36,888 + +0.8 36,888 + -0.2 36,889 - +1.3 36,889 - +0.5 36,889 - +0.2 36,889 - +1.0 36,889 - +1.3 36,889 - +0.5 36,889 - +0.8 36,995 + H281DRAFT_05763 0.30 +1.6 36,996 - H281DRAFT_05763 0.30 +0.7 36,996 - H281DRAFT_05763 0.30 +0.9 36,996 - H281DRAFT_05763 0.30 +0.8 37,157 + H281DRAFT_05763 0.68 +0.7 37,158 - H281DRAFT_05763 0.68 +0.9 37,365 - +1.0 37,872 + H281DRAFT_05764 0.77 +0.7 37,873 - H281DRAFT_05764 0.78 +0.6 37,970 + +1.1 37,970 + +1.0 38,035 - +0.3 38,053 - +1.1 38,163 - +0.3 38,163 - +0.7 38,205 + +0.5 38,206 - +1.3 38,206 - +0.7 38,480 + H281DRAFT_05765 0.27 +2.4 38,502 - H281DRAFT_05765 0.28 +0.2 38,688 + H281DRAFT_05765 0.40 +1.0 38,688 + H281DRAFT_05765 0.40 +1.5 38,688 + H281DRAFT_05765 0.40 +2.0 38,688 + H281DRAFT_05765 0.40 +1.3 38,688 + H281DRAFT_05765 0.40 +1.1 38,689 - H281DRAFT_05765 0.40 +0.1 38,689 - H281DRAFT_05765 0.40 +0.8 38,763 + H281DRAFT_05765 0.45 +0.4 38,763 + H281DRAFT_05765 0.45 -0.1 38,764 - H281DRAFT_05765 0.45 +0.6 38,764 - H281DRAFT_05765 0.45 -0.1 38,841 + H281DRAFT_05765 0.50 +0.8 38,841 + H281DRAFT_05765 0.50 -0.1 38,841 + +3.0 38,841 + H281DRAFT_05765 0.50 +0.8 38,841 + H281DRAFT_05765 0.50 +0.6 38,842 - H281DRAFT_05765 0.51 +0.6 38,842 - H281DRAFT_05765 0.51 -0.5 38,842 - H281DRAFT_05765 0.51 +0.5 38,842 - H281DRAFT_05765 0.51 -0.1 38,842 - H281DRAFT_05765 0.51 +1.0 38,842 - H281DRAFT_05765 0.51 +0.3 38,842 - H281DRAFT_05765 0.51 -0.0 38,843 + H281DRAFT_05765 0.51 +0.2 38,844 - H281DRAFT_05765 0.51 +1.1 38,892 + H281DRAFT_05765 0.54 +1.3 38,893 - H281DRAFT_05765 0.54 +0.7 38,893 - H281DRAFT_05765 0.54 -0.4 38,898 + H281DRAFT_05765 0.54 -0.6 38,898 + H281DRAFT_05765 0.54 +1.0 38,919 + H281DRAFT_05765 0.56 +1.2
Or see this region's nucleotide sequence