Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05734 and H281DRAFT_05735 are separated by 294 nucleotides H281DRAFT_05735 and H281DRAFT_05736 are separated by 313 nucleotides H281DRAFT_05736 and H281DRAFT_05737 are separated by 702 nucleotides
H281DRAFT_05734: H281DRAFT_05734 - aquaporin Z, at 6,774 to 7,514
_05734
H281DRAFT_05735: H281DRAFT_05735 - DNA-binding protein H-NS, at 7,809 to 8,111
_05735
H281DRAFT_05736: H281DRAFT_05736 - Glycosyltransferase involved in cell wall bisynthesis, at 8,425 to 9,489
_05736
H281DRAFT_05737: H281DRAFT_05737 - flagellar transcriptional activator FlhD, at 10,192 to 10,512
_05737
Position (kb)
8
9
10 Strain fitness (log2 ratio)
-1
0
1
2
3 at 7.703 kb on + strand at 7.725 kb on + strand at 7.763 kb on - strand at 7.791 kb on + strand at 8.007 kb on - strand, within H281DRAFT_05735 at 8.010 kb on + strand, within H281DRAFT_05735 at 8.030 kb on + strand, within H281DRAFT_05735 at 8.030 kb on + strand, within H281DRAFT_05735 at 8.033 kb on + strand, within H281DRAFT_05735 at 8.034 kb on - strand, within H281DRAFT_05735 at 8.034 kb on - strand, within H281DRAFT_05735 at 8.165 kb on - strand at 8.365 kb on - strand at 8.365 kb on - strand at 8.484 kb on - strand at 8.495 kb on + strand at 8.495 kb on + strand at 8.496 kb on - strand at 8.608 kb on + strand, within H281DRAFT_05736 at 8.608 kb on + strand, within H281DRAFT_05736 at 8.609 kb on - strand at 8.613 kb on + strand, within H281DRAFT_05736 at 8.613 kb on + strand, within H281DRAFT_05736 at 8.614 kb on - strand, within H281DRAFT_05736 at 8.615 kb on + strand, within H281DRAFT_05736 at 8.616 kb on - strand, within H281DRAFT_05736 at 8.616 kb on - strand, within H281DRAFT_05736 at 8.849 kb on + strand, within H281DRAFT_05736 at 8.849 kb on + strand, within H281DRAFT_05736 at 8.849 kb on + strand, within H281DRAFT_05736 at 8.849 kb on + strand, within H281DRAFT_05736 at 8.850 kb on - strand, within H281DRAFT_05736 at 8.850 kb on - strand, within H281DRAFT_05736 at 8.970 kb on - strand, within H281DRAFT_05736 at 9.023 kb on + strand, within H281DRAFT_05736 at 9.023 kb on + strand, within H281DRAFT_05736 at 9.023 kb on + strand, within H281DRAFT_05736 at 9.023 kb on + strand, within H281DRAFT_05736 at 9.023 kb on + strand, within H281DRAFT_05736 at 9.024 kb on - strand, within H281DRAFT_05736 at 9.200 kb on + strand, within H281DRAFT_05736 at 9.200 kb on + strand, within H281DRAFT_05736 at 9.201 kb on - strand, within H281DRAFT_05736 at 9.201 kb on - strand, within H281DRAFT_05736 at 9.201 kb on - strand, within H281DRAFT_05736 at 9.201 kb on - strand, within H281DRAFT_05736 at 9.201 kb on - strand, within H281DRAFT_05736 at 9.247 kb on + strand, within H281DRAFT_05736 at 9.247 kb on + strand, within H281DRAFT_05736 at 9.247 kb on + strand, within H281DRAFT_05736 at 9.248 kb on - strand, within H281DRAFT_05736 at 9.410 kb on + strand at 9.410 kb on + strand at 9.411 kb on - strand at 9.461 kb on + strand at 9.462 kb on - strand at 9.508 kb on - strand at 9.680 kb on - strand at 9.701 kb on + strand at 9.702 kb on - strand at 9.785 kb on + strand at 9.787 kb on + strand at 9.787 kb on + strand at 9.787 kb on + strand at 9.788 kb on - strand at 9.823 kb on + strand at 9.824 kb on - strand at 9.824 kb on - strand at 9.824 kb on - strand at 9.847 kb on + strand at 9.849 kb on + strand at 9.849 kb on + strand at 9.924 kb on - strand at 9.939 kb on + strand at 9.964 kb on + strand at 10.012 kb on + strand at 10.012 kb on + strand at 10.028 kb on + strand at 10.028 kb on + strand at 10.028 kb on + strand at 10.029 kb on - strand at 10.029 kb on - strand at 10.175 kb on + strand at 10.175 kb on + strand at 10.176 kb on - strand at 10.243 kb on + strand, within H281DRAFT_05737 at 10.243 kb on + strand, within H281DRAFT_05737 at 10.244 kb on - strand, within H281DRAFT_05737 at 10.244 kb on - strand, within H281DRAFT_05737
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 7,703 + +0.6 7,725 + -0.3 7,763 - +0.5 7,791 + -0.0 8,007 - H281DRAFT_05735 0.65 -0.0 8,010 + H281DRAFT_05735 0.66 -0.1 8,030 + H281DRAFT_05735 0.73 +0.2 8,030 + H281DRAFT_05735 0.73 -0.7 8,033 + H281DRAFT_05735 0.74 -0.1 8,034 - H281DRAFT_05735 0.74 -0.6 8,034 - H281DRAFT_05735 0.74 -0.5 8,165 - -0.6 8,365 - -0.5 8,365 - +1.0 8,484 - +0.0 8,495 + -0.4 8,495 + +1.0 8,496 - -0.4 8,608 + H281DRAFT_05736 0.17 -0.6 8,608 + H281DRAFT_05736 0.17 -0.2 8,609 - +1.0 8,613 + H281DRAFT_05736 0.18 -0.5 8,613 + H281DRAFT_05736 0.18 +1.1 8,614 - H281DRAFT_05736 0.18 -0.0 8,615 + H281DRAFT_05736 0.18 +0.2 8,616 - H281DRAFT_05736 0.18 +0.1 8,616 - H281DRAFT_05736 0.18 +1.2 8,849 + H281DRAFT_05736 0.40 -0.3 8,849 + H281DRAFT_05736 0.40 -0.3 8,849 + H281DRAFT_05736 0.40 -0.0 8,849 + H281DRAFT_05736 0.40 +3.4 8,850 - H281DRAFT_05736 0.40 +0.4 8,850 - H281DRAFT_05736 0.40 -0.3 8,970 - H281DRAFT_05736 0.51 +0.6 9,023 + H281DRAFT_05736 0.56 -0.5 9,023 + H281DRAFT_05736 0.56 +1.0 9,023 + H281DRAFT_05736 0.56 +0.6 9,023 + H281DRAFT_05736 0.56 -0.4 9,023 + H281DRAFT_05736 0.56 -1.1 9,024 - H281DRAFT_05736 0.56 -0.2 9,200 + H281DRAFT_05736 0.73 -0.6 9,200 + H281DRAFT_05736 0.73 +1.0 9,201 - H281DRAFT_05736 0.73 +1.0 9,201 - H281DRAFT_05736 0.73 -0.0 9,201 - H281DRAFT_05736 0.73 -0.2 9,201 - H281DRAFT_05736 0.73 +0.2 9,201 - H281DRAFT_05736 0.73 +0.6 9,247 + H281DRAFT_05736 0.77 -0.0 9,247 + H281DRAFT_05736 0.77 +0.2 9,247 + H281DRAFT_05736 0.77 -0.8 9,248 - H281DRAFT_05736 0.77 -0.5 9,410 + -0.3 9,410 + -0.1 9,411 - +0.2 9,461 + +0.9 9,462 - +0.1 9,508 - -0.2 9,680 - -0.1 9,701 + -0.4 9,702 - -1.0 9,785 + -0.3 9,787 + -0.3 9,787 + -0.4 9,787 + -1.0 9,788 - -1.2 9,823 + +0.5 9,824 - -0.8 9,824 - +0.3 9,824 - -0.6 9,847 + -0.1 9,849 + -0.6 9,849 + -0.3 9,924 - -0.6 9,939 + +0.0 9,964 + +1.3 10,012 + +0.1 10,012 + -0.4 10,028 + -0.2 10,028 + -0.4 10,028 + -0.0 10,029 - +0.4 10,029 - +1.5 10,175 + +0.3 10,175 + -1.0 10,176 - +0.3 10,243 + H281DRAFT_05737 0.16 +0.2 10,243 + H281DRAFT_05737 0.16 +1.0 10,244 - H281DRAFT_05737 0.16 -0.2 10,244 - H281DRAFT_05737 0.16 +1.6
Or see this region's nucleotide sequence