Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05681 and H281DRAFT_05682 are separated by 151 nucleotides H281DRAFT_05682 and H281DRAFT_05683 are separated by 155 nucleotides H281DRAFT_05683 and H281DRAFT_05684 are separated by 70 nucleotides
H281DRAFT_05681: H281DRAFT_05681 - transcriptional regulator, TetR family, at 96,999 to 97,667
_05681
H281DRAFT_05682: H281DRAFT_05682 - Sugar phosphate permease, at 97,819 to 99,102
_05682
H281DRAFT_05683: H281DRAFT_05683 - Nitroreductase, at 99,258 to 99,851
_05683
H281DRAFT_05684: H281DRAFT_05684 - Predicted arabinose efflux permease, MFS family, at 99,922 to 101,397
_05684
Position (kb) 97
98
99
100 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 96.827 kb on + strand at 96.959 kb on + strand at 96.959 kb on + strand at 96.959 kb on + strand at 96.959 kb on + strand at 96.960 kb on - strand at 96.961 kb on + strand at 96.961 kb on + strand at 96.961 kb on + strand at 96.961 kb on + strand at 96.962 kb on - strand at 96.962 kb on - strand at 96.962 kb on - strand at 96.962 kb on - strand at 97.035 kb on - strand at 97.087 kb on + strand, within H281DRAFT_05681 at 97.088 kb on - strand, within H281DRAFT_05681 at 97.105 kb on + strand, within H281DRAFT_05681 at 97.105 kb on + strand, within H281DRAFT_05681 at 97.176 kb on + strand, within H281DRAFT_05681 at 97.177 kb on - strand, within H281DRAFT_05681 at 97.328 kb on - strand, within H281DRAFT_05681 at 97.328 kb on - strand, within H281DRAFT_05681 at 97.384 kb on + strand, within H281DRAFT_05681 at 97.417 kb on + strand, within H281DRAFT_05681 at 97.418 kb on - strand, within H281DRAFT_05681 at 97.456 kb on + strand, within H281DRAFT_05681 at 97.634 kb on + strand at 97.770 kb on + strand at 97.841 kb on + strand at 97.841 kb on + strand at 98.009 kb on + strand, within H281DRAFT_05682 at 98.010 kb on - strand, within H281DRAFT_05682 at 98.010 kb on - strand, within H281DRAFT_05682 at 98.011 kb on + strand, within H281DRAFT_05682 at 98.012 kb on - strand, within H281DRAFT_05682 at 98.012 kb on - strand, within H281DRAFT_05682 at 98.012 kb on - strand, within H281DRAFT_05682 at 98.018 kb on + strand, within H281DRAFT_05682 at 98.323 kb on + strand, within H281DRAFT_05682 at 98.431 kb on + strand, within H281DRAFT_05682 at 98.432 kb on - strand, within H281DRAFT_05682 at 98.621 kb on - strand, within H281DRAFT_05682 at 98.743 kb on + strand, within H281DRAFT_05682 at 98.743 kb on + strand, within H281DRAFT_05682 at 98.746 kb on + strand, within H281DRAFT_05682 at 98.746 kb on + strand, within H281DRAFT_05682 at 98.747 kb on - strand, within H281DRAFT_05682 at 98.747 kb on - strand, within H281DRAFT_05682 at 98.747 kb on - strand, within H281DRAFT_05682 at 98.773 kb on + strand, within H281DRAFT_05682 at 98.773 kb on + strand, within H281DRAFT_05682 at 98.774 kb on - strand, within H281DRAFT_05682 at 98.774 kb on - strand, within H281DRAFT_05682 at 98.774 kb on - strand, within H281DRAFT_05682 at 98.774 kb on - strand, within H281DRAFT_05682 at 98.830 kb on + strand, within H281DRAFT_05682 at 98.994 kb on + strand at 98.995 kb on - strand at 98.998 kb on + strand at 98.998 kb on + strand at 98.998 kb on + strand at 98.999 kb on - strand at 98.999 kb on - strand at 99.061 kb on - strand at 99.061 kb on - strand at 99.110 kb on - strand at 99.149 kb on - strand at 99.160 kb on - strand at 99.204 kb on + strand at 99.204 kb on + strand at 99.204 kb on + strand at 99.204 kb on + strand at 99.204 kb on + strand at 99.204 kb on + strand at 99.204 kb on + strand at 99.204 kb on + strand at 99.204 kb on + strand at 99.205 kb on - strand at 99.205 kb on - strand at 99.205 kb on - strand at 99.205 kb on - strand at 99.205 kb on - strand at 99.205 kb on - strand at 99.205 kb on - strand at 99.205 kb on - strand at 99.205 kb on - strand at 99.205 kb on - strand at 99.205 kb on - strand at 99.331 kb on - strand, within H281DRAFT_05683 at 99.402 kb on + strand, within H281DRAFT_05683 at 99.402 kb on + strand, within H281DRAFT_05683 at 99.403 kb on - strand, within H281DRAFT_05683 at 99.403 kb on - strand, within H281DRAFT_05683 at 99.404 kb on + strand, within H281DRAFT_05683 at 99.582 kb on + strand, within H281DRAFT_05683 at 99.582 kb on + strand, within H281DRAFT_05683 at 99.878 kb on - strand at 99.924 kb on - strand at 100.049 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 96,827 + -0.3 96,959 + -0.0 96,959 + -0.6 96,959 + +0.3 96,959 + -0.1 96,960 - -0.6 96,961 + +0.4 96,961 + -0.7 96,961 + +0.1 96,961 + +0.2 96,962 - +0.1 96,962 - -0.2 96,962 - +0.0 96,962 - +0.3 97,035 - -0.5 97,087 + H281DRAFT_05681 0.13 +0.1 97,088 - H281DRAFT_05681 0.13 +0.4 97,105 + H281DRAFT_05681 0.16 -0.8 97,105 + H281DRAFT_05681 0.16 -0.5 97,176 + H281DRAFT_05681 0.26 -0.5 97,177 - H281DRAFT_05681 0.27 -1.8 97,328 - H281DRAFT_05681 0.49 +0.2 97,328 - H281DRAFT_05681 0.49 -1.4 97,384 + H281DRAFT_05681 0.58 -1.5 97,417 + H281DRAFT_05681 0.62 +0.1 97,418 - H281DRAFT_05681 0.63 -0.9 97,456 + H281DRAFT_05681 0.68 +0.1 97,634 + +2.1 97,770 + -0.1 97,841 + -0.0 97,841 + -0.2 98,009 + H281DRAFT_05682 0.15 +0.3 98,010 - H281DRAFT_05682 0.15 +1.1 98,010 - H281DRAFT_05682 0.15 -0.3 98,011 + H281DRAFT_05682 0.15 +0.4 98,012 - H281DRAFT_05682 0.15 -0.1 98,012 - H281DRAFT_05682 0.15 +0.1 98,012 - H281DRAFT_05682 0.15 +0.3 98,018 + H281DRAFT_05682 0.15 -0.4 98,323 + H281DRAFT_05682 0.39 -0.1 98,431 + H281DRAFT_05682 0.48 +0.3 98,432 - H281DRAFT_05682 0.48 +1.2 98,621 - H281DRAFT_05682 0.62 +1.4 98,743 + H281DRAFT_05682 0.72 +0.1 98,743 + H281DRAFT_05682 0.72 +0.3 98,746 + H281DRAFT_05682 0.72 -1.8 98,746 + H281DRAFT_05682 0.72 +0.5 98,747 - H281DRAFT_05682 0.72 +0.1 98,747 - H281DRAFT_05682 0.72 -2.9 98,747 - H281DRAFT_05682 0.72 +0.0 98,773 + H281DRAFT_05682 0.74 +0.2 98,773 + H281DRAFT_05682 0.74 +0.7 98,774 - H281DRAFT_05682 0.74 -0.6 98,774 - H281DRAFT_05682 0.74 +0.3 98,774 - H281DRAFT_05682 0.74 +0.3 98,774 - H281DRAFT_05682 0.74 -0.5 98,830 + H281DRAFT_05682 0.79 -0.0 98,994 + +0.2 98,995 - +0.5 98,998 + +0.6 98,998 + +0.2 98,998 + +0.9 98,999 - -0.6 98,999 - +0.3 99,061 - +1.5 99,061 - -0.1 99,110 - -0.5 99,149 - -0.5 99,160 - +0.2 99,204 + -0.5 99,204 + -0.6 99,204 + -0.3 99,204 + -1.2 99,204 + -0.0 99,204 + -0.1 99,204 + -0.0 99,204 + -1.4 99,204 + -1.0 99,205 - -0.1 99,205 - +0.5 99,205 - +0.7 99,205 - +0.1 99,205 - +0.6 99,205 - +0.1 99,205 - -0.9 99,205 - +0.6 99,205 - -0.3 99,205 - -0.2 99,205 - -0.7 99,331 - H281DRAFT_05683 0.12 +0.2 99,402 + H281DRAFT_05683 0.24 +0.3 99,402 + H281DRAFT_05683 0.24 +0.3 99,403 - H281DRAFT_05683 0.24 +0.3 99,403 - H281DRAFT_05683 0.24 +0.1 99,404 + H281DRAFT_05683 0.25 +0.1 99,582 + H281DRAFT_05683 0.55 -0.2 99,582 + H281DRAFT_05683 0.55 +0.2 99,878 - +0.1 99,924 - +0.1 100,049 + -2.3
Or see this region's nucleotide sequence