Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05679 and H281DRAFT_05680 are separated by 1 nucleotides H281DRAFT_05680 and H281DRAFT_05681 are separated by 212 nucleotides H281DRAFT_05681 and H281DRAFT_05682 are separated by 151 nucleotides
H281DRAFT_05679: H281DRAFT_05679 - SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase, at 95,388 to 96,230
_05679
H281DRAFT_05680: H281DRAFT_05680 - hypothetical protein, at 96,232 to 96,786
_05680
H281DRAFT_05681: H281DRAFT_05681 - transcriptional regulator, TetR family, at 96,999 to 97,667
_05681
H281DRAFT_05682: H281DRAFT_05682 - Sugar phosphate permease, at 97,819 to 99,102
_05682
Position (kb) 96
97
98 Strain fitness (log2 ratio) -2
-1
0
1
2 at 96.020 kb on + strand, within H281DRAFT_05679 at 96.020 kb on + strand, within H281DRAFT_05679 at 96.021 kb on - strand, within H281DRAFT_05679 at 96.245 kb on - strand at 96.249 kb on + strand at 96.299 kb on + strand, within H281DRAFT_05680 at 96.300 kb on - strand, within H281DRAFT_05680 at 96.300 kb on - strand, within H281DRAFT_05680 at 96.342 kb on + strand, within H281DRAFT_05680 at 96.342 kb on + strand, within H281DRAFT_05680 at 96.342 kb on + strand, within H281DRAFT_05680 at 96.343 kb on - strand, within H281DRAFT_05680 at 96.393 kb on - strand, within H281DRAFT_05680 at 96.393 kb on - strand, within H281DRAFT_05680 at 96.393 kb on - strand, within H281DRAFT_05680 at 96.432 kb on - strand, within H281DRAFT_05680 at 96.517 kb on - strand, within H281DRAFT_05680 at 96.518 kb on + strand, within H281DRAFT_05680 at 96.518 kb on + strand, within H281DRAFT_05680 at 96.519 kb on - strand, within H281DRAFT_05680 at 96.519 kb on - strand, within H281DRAFT_05680 at 96.519 kb on - strand, within H281DRAFT_05680 at 96.535 kb on + strand, within H281DRAFT_05680 at 96.536 kb on - strand, within H281DRAFT_05680 at 96.564 kb on + strand, within H281DRAFT_05680 at 96.565 kb on - strand, within H281DRAFT_05680 at 96.718 kb on + strand, within H281DRAFT_05680 at 96.719 kb on - strand, within H281DRAFT_05680 at 96.827 kb on + strand at 96.959 kb on + strand at 96.959 kb on + strand at 96.959 kb on + strand at 96.959 kb on + strand at 96.960 kb on - strand at 96.961 kb on + strand at 96.961 kb on + strand at 96.961 kb on + strand at 96.961 kb on + strand at 96.962 kb on - strand at 96.962 kb on - strand at 96.962 kb on - strand at 96.962 kb on - strand at 97.035 kb on - strand at 97.087 kb on + strand, within H281DRAFT_05681 at 97.088 kb on - strand, within H281DRAFT_05681 at 97.105 kb on + strand, within H281DRAFT_05681 at 97.105 kb on + strand, within H281DRAFT_05681 at 97.176 kb on + strand, within H281DRAFT_05681 at 97.177 kb on - strand, within H281DRAFT_05681 at 97.328 kb on - strand, within H281DRAFT_05681 at 97.328 kb on - strand, within H281DRAFT_05681 at 97.384 kb on + strand, within H281DRAFT_05681 at 97.417 kb on + strand, within H281DRAFT_05681 at 97.418 kb on - strand, within H281DRAFT_05681 at 97.456 kb on + strand, within H281DRAFT_05681 at 97.634 kb on + strand at 97.770 kb on + strand at 97.841 kb on + strand at 97.841 kb on + strand at 98.009 kb on + strand, within H281DRAFT_05682 at 98.010 kb on - strand, within H281DRAFT_05682 at 98.010 kb on - strand, within H281DRAFT_05682 at 98.011 kb on + strand, within H281DRAFT_05682 at 98.012 kb on - strand, within H281DRAFT_05682 at 98.012 kb on - strand, within H281DRAFT_05682 at 98.012 kb on - strand, within H281DRAFT_05682 at 98.018 kb on + strand, within H281DRAFT_05682 at 98.323 kb on + strand, within H281DRAFT_05682 at 98.431 kb on + strand, within H281DRAFT_05682 at 98.432 kb on - strand, within H281DRAFT_05682 at 98.621 kb on - strand, within H281DRAFT_05682
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 96,020 + H281DRAFT_05679 0.75 +1.1 96,020 + H281DRAFT_05679 0.75 -0.5 96,021 - H281DRAFT_05679 0.75 +0.6 96,245 - -0.2 96,249 + -0.1 96,299 + H281DRAFT_05680 0.12 +0.2 96,300 - H281DRAFT_05680 0.12 -0.0 96,300 - H281DRAFT_05680 0.12 +0.4 96,342 + H281DRAFT_05680 0.20 -0.0 96,342 + H281DRAFT_05680 0.20 +0.0 96,342 + H281DRAFT_05680 0.20 -0.8 96,343 - H281DRAFT_05680 0.20 -1.3 96,393 - H281DRAFT_05680 0.29 -0.2 96,393 - H281DRAFT_05680 0.29 -0.3 96,393 - H281DRAFT_05680 0.29 -0.2 96,432 - H281DRAFT_05680 0.36 -0.3 96,517 - H281DRAFT_05680 0.51 +0.1 96,518 + H281DRAFT_05680 0.52 +0.2 96,518 + H281DRAFT_05680 0.52 -1.2 96,519 - H281DRAFT_05680 0.52 +1.2 96,519 - H281DRAFT_05680 0.52 -0.4 96,519 - H281DRAFT_05680 0.52 -0.0 96,535 + H281DRAFT_05680 0.55 +0.1 96,536 - H281DRAFT_05680 0.55 +0.2 96,564 + H281DRAFT_05680 0.60 -0.5 96,565 - H281DRAFT_05680 0.60 +0.2 96,718 + H281DRAFT_05680 0.88 -0.4 96,719 - H281DRAFT_05680 0.88 +0.1 96,827 + -0.3 96,959 + -0.0 96,959 + -0.6 96,959 + +0.3 96,959 + -0.1 96,960 - -0.6 96,961 + +0.4 96,961 + -0.7 96,961 + +0.1 96,961 + +0.2 96,962 - +0.1 96,962 - -0.2 96,962 - +0.0 96,962 - +0.3 97,035 - -0.5 97,087 + H281DRAFT_05681 0.13 +0.1 97,088 - H281DRAFT_05681 0.13 +0.4 97,105 + H281DRAFT_05681 0.16 -0.8 97,105 + H281DRAFT_05681 0.16 -0.5 97,176 + H281DRAFT_05681 0.26 -0.5 97,177 - H281DRAFT_05681 0.27 -1.8 97,328 - H281DRAFT_05681 0.49 +0.2 97,328 - H281DRAFT_05681 0.49 -1.4 97,384 + H281DRAFT_05681 0.58 -1.5 97,417 + H281DRAFT_05681 0.62 +0.1 97,418 - H281DRAFT_05681 0.63 -0.9 97,456 + H281DRAFT_05681 0.68 +0.1 97,634 + +2.1 97,770 + -0.1 97,841 + -0.0 97,841 + -0.2 98,009 + H281DRAFT_05682 0.15 +0.3 98,010 - H281DRAFT_05682 0.15 +1.1 98,010 - H281DRAFT_05682 0.15 -0.3 98,011 + H281DRAFT_05682 0.15 +0.4 98,012 - H281DRAFT_05682 0.15 -0.1 98,012 - H281DRAFT_05682 0.15 +0.1 98,012 - H281DRAFT_05682 0.15 +0.3 98,018 + H281DRAFT_05682 0.15 -0.4 98,323 + H281DRAFT_05682 0.39 -0.1 98,431 + H281DRAFT_05682 0.48 +0.3 98,432 - H281DRAFT_05682 0.48 +1.2 98,621 - H281DRAFT_05682 0.62 +1.4
Or see this region's nucleotide sequence