Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05620 and H281DRAFT_05621 are separated by 128 nucleotides H281DRAFT_05621 and H281DRAFT_05622 are separated by 139 nucleotides
H281DRAFT_05620: H281DRAFT_05620 - glutamate synthase (NADH) large subunit, at 41,247 to 45,950
_05620
H281DRAFT_05621: H281DRAFT_05621 - glutamate synthase (NADH) small subunit, at 46,079 to 47,548
_05621
H281DRAFT_05622: H281DRAFT_05622 - D-amino-acid dehydrogenase, at 47,688 to 49,016
_05622
Position (kb) 46
47
48 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 45.152 kb on - strand, within H281DRAFT_05620 at 45.152 kb on - strand, within H281DRAFT_05620 at 45.152 kb on - strand, within H281DRAFT_05620 at 45.152 kb on - strand, within H281DRAFT_05620 at 45.177 kb on - strand, within H281DRAFT_05620 at 45.217 kb on - strand, within H281DRAFT_05620 at 45.441 kb on + strand, within H281DRAFT_05620 at 45.441 kb on + strand, within H281DRAFT_05620 at 45.441 kb on + strand, within H281DRAFT_05620 at 45.441 kb on + strand, within H281DRAFT_05620 at 45.442 kb on - strand, within H281DRAFT_05620 at 45.503 kb on + strand at 45.504 kb on - strand at 45.555 kb on + strand at 45.599 kb on + strand at 45.639 kb on + strand at 45.639 kb on + strand at 45.640 kb on - strand at 45.888 kb on + strand at 45.889 kb on - strand at 45.930 kb on - strand at 45.998 kb on + strand at 45.998 kb on + strand at 46.053 kb on + strand at 46.054 kb on - strand at 46.057 kb on + strand at 46.057 kb on + strand at 46.057 kb on + strand at 46.058 kb on - strand at 46.058 kb on - strand at 46.058 kb on - strand at 46.063 kb on + strand at 46.064 kb on - strand at 46.064 kb on - strand at 46.127 kb on + strand at 46.127 kb on + strand at 46.157 kb on + strand at 46.157 kb on + strand at 46.158 kb on - strand at 46.158 kb on - strand at 46.158 kb on - strand at 46.158 kb on - strand at 46.158 kb on - strand at 46.628 kb on + strand, within H281DRAFT_05621 at 46.676 kb on - strand, within H281DRAFT_05621 at 47.105 kb on + strand, within H281DRAFT_05621 at 47.405 kb on + strand at 47.405 kb on + strand at 47.409 kb on - strand at 47.658 kb on + strand at 48.118 kb on + strand, within H281DRAFT_05622 at 48.146 kb on + strand, within H281DRAFT_05622 at 48.392 kb on + strand, within H281DRAFT_05622 at 48.392 kb on + strand, within H281DRAFT_05622 at 48.393 kb on - strand, within H281DRAFT_05622 at 48.393 kb on - strand, within H281DRAFT_05622 at 48.398 kb on + strand, within H281DRAFT_05622 at 48.400 kb on - strand, within H281DRAFT_05622
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 45,152 - H281DRAFT_05620 0.83 -3.5 45,152 - H281DRAFT_05620 0.83 -3.5 45,152 - H281DRAFT_05620 0.83 -4.2 45,152 - H281DRAFT_05620 0.83 -2.2 45,177 - H281DRAFT_05620 0.84 -4.7 45,217 - H281DRAFT_05620 0.84 -5.6 45,441 + H281DRAFT_05620 0.89 -0.1 45,441 + H281DRAFT_05620 0.89 -3.2 45,441 + H281DRAFT_05620 0.89 -4.6 45,441 + H281DRAFT_05620 0.89 -4.7 45,442 - H281DRAFT_05620 0.89 -1.8 45,503 + -2.6 45,504 - -2.1 45,555 + -4.6 45,599 + -2.5 45,639 + +1.1 45,639 + -4.6 45,640 - -2.5 45,888 + +1.1 45,889 - -3.2 45,930 - -3.5 45,998 + +0.4 45,998 + -3.0 46,053 + +1.3 46,054 - -3.5 46,057 + +0.4 46,057 + +1.1 46,057 + -0.5 46,058 - -2.1 46,058 - -4.5 46,058 - -3.5 46,063 + +0.6 46,064 - +0.1 46,064 - -3.7 46,127 + -4.0 46,127 + -5.1 46,157 + -3.3 46,157 + -4.6 46,158 - -4.4 46,158 - -5.1 46,158 - -1.8 46,158 - -3.2 46,158 - -2.1 46,628 + H281DRAFT_05621 0.37 -3.9 46,676 - H281DRAFT_05621 0.41 -4.2 47,105 + H281DRAFT_05621 0.70 -4.8 47,405 + -4.1 47,405 + -4.2 47,409 - -3.4 47,658 + +0.2 48,118 + H281DRAFT_05622 0.32 -0.5 48,146 + H281DRAFT_05622 0.34 -0.9 48,392 + H281DRAFT_05622 0.53 +1.1 48,392 + H281DRAFT_05622 0.53 -0.0 48,393 - H281DRAFT_05622 0.53 -0.5 48,393 - H281DRAFT_05622 0.53 +0.3 48,398 + H281DRAFT_05622 0.53 -2.2 48,400 - H281DRAFT_05622 0.54 -0.6
Or see this region's nucleotide sequence