Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05533 and H281DRAFT_05534 are separated by 38 nucleotides H281DRAFT_05534 and H281DRAFT_05535 overlap by 7 nucleotides H281DRAFT_05535 and H281DRAFT_05536 are separated by 8 nucleotides
H281DRAFT_05533: H281DRAFT_05533 - putative spermidine/putrescine transport system substrate-binding protein, at 117,723 to 118,808
_05533
H281DRAFT_05534: H281DRAFT_05534 - Zn-dependent dipeptidase, dipeptidase homolog, at 118,847 to 119,812
_05534
H281DRAFT_05535: H281DRAFT_05535 - YD repeat-containing protein, at 119,806 to 120,549
_05535
H281DRAFT_05536: H281DRAFT_05536 - hypothetical protein, at 120,558 to 122,282
_05536
Position (kb) 118
119
120 Strain fitness (log2 ratio) -2
-1
0
1 at 117.859 kb on + strand, within H281DRAFT_05533 at 117.860 kb on - strand, within H281DRAFT_05533 at 117.860 kb on - strand, within H281DRAFT_05533 at 117.930 kb on - strand, within H281DRAFT_05533 at 117.978 kb on - strand, within H281DRAFT_05533 at 118.443 kb on - strand, within H281DRAFT_05533 at 118.465 kb on - strand, within H281DRAFT_05533 at 118.669 kb on + strand, within H281DRAFT_05533 at 118.670 kb on - strand, within H281DRAFT_05533 at 118.676 kb on + strand, within H281DRAFT_05533 at 118.822 kb on - strand at 119.348 kb on - strand, within H281DRAFT_05534 at 119.485 kb on - strand, within H281DRAFT_05534 at 119.641 kb on + strand, within H281DRAFT_05534 at 119.873 kb on + strand at 119.970 kb on - strand, within H281DRAFT_05535 at 120.147 kb on - strand, within H281DRAFT_05535 at 120.301 kb on - strand, within H281DRAFT_05535 at 120.301 kb on - strand, within H281DRAFT_05535 at 120.505 kb on + strand at 120.721 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 117,859 + H281DRAFT_05533 0.13 +0.7 117,860 - H281DRAFT_05533 0.13 +0.1 117,860 - H281DRAFT_05533 0.13 +0.6 117,930 - H281DRAFT_05533 0.19 -0.3 117,978 - H281DRAFT_05533 0.23 -1.2 118,443 - H281DRAFT_05533 0.66 -0.2 118,465 - H281DRAFT_05533 0.68 -0.3 118,669 + H281DRAFT_05533 0.87 -0.1 118,670 - H281DRAFT_05533 0.87 +0.2 118,676 + H281DRAFT_05533 0.88 +0.8 118,822 - -0.5 119,348 - H281DRAFT_05534 0.52 -2.2 119,485 - H281DRAFT_05534 0.66 -1.5 119,641 + H281DRAFT_05534 0.82 -0.4 119,873 + -0.4 119,970 - H281DRAFT_05535 0.22 -0.4 120,147 - H281DRAFT_05535 0.46 -0.2 120,301 - H281DRAFT_05535 0.67 +0.5 120,301 - H281DRAFT_05535 0.67 -0.2 120,505 + +0.2 120,721 - +1.3
Or see this region's nucleotide sequence