Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05472 and H281DRAFT_05473 are separated by 24 nucleotides H281DRAFT_05473 and H281DRAFT_05474 overlap by 4 nucleotides H281DRAFT_05474 and H281DRAFT_05475 overlap by 11 nucleotides
H281DRAFT_05472: H281DRAFT_05472 - L-alanine-DL-glutamate epimerase, at 53,151 to 54,257
_05472
H281DRAFT_05473: H281DRAFT_05473 - hypothetical protein, at 54,282 to 55,199
_05473
H281DRAFT_05474: H281DRAFT_05474 - Gluconate 2-dehydrogenase subunit 3, at 55,196 to 55,843
_05474
H281DRAFT_05475: H281DRAFT_05475 - Choline dehydrogenase, at 55,833 to 57,488
_05475
Position (kb) 54
55
56 Strain fitness (log2 ratio) -2
-1
0
1 at 53.313 kb on + strand, within H281DRAFT_05472 at 53.314 kb on - strand, within H281DRAFT_05472 at 53.314 kb on - strand, within H281DRAFT_05472 at 54.030 kb on + strand, within H281DRAFT_05472 at 54.130 kb on + strand, within H281DRAFT_05472 at 54.130 kb on + strand, within H281DRAFT_05472 at 54.130 kb on + strand, within H281DRAFT_05472 at 54.504 kb on + strand, within H281DRAFT_05473 at 54.505 kb on - strand, within H281DRAFT_05473 at 54.505 kb on - strand, within H281DRAFT_05473 at 54.648 kb on + strand, within H281DRAFT_05473 at 54.649 kb on - strand, within H281DRAFT_05473 at 54.649 kb on - strand, within H281DRAFT_05473 at 54.649 kb on - strand, within H281DRAFT_05473 at 54.649 kb on - strand, within H281DRAFT_05473 at 54.912 kb on + strand, within H281DRAFT_05473 at 54.913 kb on - strand, within H281DRAFT_05473 at 55.679 kb on + strand, within H281DRAFT_05474 at 55.680 kb on - strand, within H281DRAFT_05474 at 55.680 kb on - strand, within H281DRAFT_05474 at 55.683 kb on - strand, within H281DRAFT_05474 at 55.683 kb on - strand, within H281DRAFT_05474 at 55.683 kb on - strand, within H281DRAFT_05474 at 55.683 kb on - strand, within H281DRAFT_05474 at 55.817 kb on + strand at 55.817 kb on + strand at 55.817 kb on + strand at 55.817 kb on + strand at 55.818 kb on - strand at 55.818 kb on - strand at 55.818 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 53,313 + H281DRAFT_05472 0.15 +0.2 53,314 - H281DRAFT_05472 0.15 -1.0 53,314 - H281DRAFT_05472 0.15 -1.1 54,030 + H281DRAFT_05472 0.79 +0.1 54,130 + H281DRAFT_05472 0.88 -0.5 54,130 + H281DRAFT_05472 0.88 +1.0 54,130 + H281DRAFT_05472 0.88 -2.1 54,504 + H281DRAFT_05473 0.24 +1.1 54,505 - H281DRAFT_05473 0.24 +0.9 54,505 - H281DRAFT_05473 0.24 +0.2 54,648 + H281DRAFT_05473 0.40 -0.1 54,649 - H281DRAFT_05473 0.40 +0.0 54,649 - H281DRAFT_05473 0.40 -0.4 54,649 - H281DRAFT_05473 0.40 -0.1 54,649 - H281DRAFT_05473 0.40 +0.3 54,912 + H281DRAFT_05473 0.69 -0.0 54,913 - H281DRAFT_05473 0.69 +1.0 55,679 + H281DRAFT_05474 0.75 -0.5 55,680 - H281DRAFT_05474 0.75 +0.7 55,680 - H281DRAFT_05474 0.75 +0.6 55,683 - H281DRAFT_05474 0.75 +1.3 55,683 - H281DRAFT_05474 0.75 -0.0 55,683 - H281DRAFT_05474 0.75 +0.4 55,683 - H281DRAFT_05474 0.75 +0.5 55,817 + +0.4 55,817 + -0.3 55,817 + +0.3 55,817 + -0.5 55,818 - -0.2 55,818 - -0.3 55,818 - -1.0
Or see this region's nucleotide sequence