Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05355 and H281DRAFT_05356 are separated by 153 nucleotides H281DRAFT_05356 and H281DRAFT_05357 are separated by 193 nucleotides H281DRAFT_05357 and H281DRAFT_05358 are separated by 409 nucleotides
H281DRAFT_05355: H281DRAFT_05355 - Peptidase_C39 like family protein, at 108,255 to 108,887
_05355
H281DRAFT_05356: H281DRAFT_05356 - hypothetical protein, at 109,041 to 109,304
_05356
H281DRAFT_05357: H281DRAFT_05357 - ornithine cyclodeaminase, at 109,498 to 110,433
_05357
H281DRAFT_05358: H281DRAFT_05358 - glucose-6-phosphate 1-dehydrogenase, at 110,843 to 112,324
_05358
Position (kb)
109
110
111 Strain fitness (log2 ratio)
-1
0
1 at 108.557 kb on + strand, within H281DRAFT_05355 at 108.557 kb on + strand, within H281DRAFT_05355 at 108.558 kb on - strand, within H281DRAFT_05355 at 108.558 kb on - strand, within H281DRAFT_05355 at 108.558 kb on - strand, within H281DRAFT_05355 at 108.558 kb on - strand, within H281DRAFT_05355 at 108.562 kb on - strand, within H281DRAFT_05355 at 108.816 kb on + strand, within H281DRAFT_05355 at 108.816 kb on + strand, within H281DRAFT_05355 at 108.816 kb on + strand, within H281DRAFT_05355 at 108.846 kb on + strand at 108.846 kb on + strand at 108.869 kb on + strand at 108.870 kb on - strand at 109.040 kb on + strand at 109.094 kb on + strand, within H281DRAFT_05356 at 109.178 kb on + strand, within H281DRAFT_05356 at 109.179 kb on - strand, within H281DRAFT_05356 at 109.410 kb on + strand at 109.411 kb on - strand at 109.460 kb on + strand at 109.555 kb on + strand at 109.751 kb on + strand, within H281DRAFT_05357 at 109.752 kb on - strand, within H281DRAFT_05357 at 109.752 kb on - strand, within H281DRAFT_05357 at 109.952 kb on - strand, within H281DRAFT_05357 at 110.123 kb on - strand, within H281DRAFT_05357 at 110.497 kb on + strand at 110.529 kb on - strand at 110.532 kb on + strand at 110.533 kb on - strand at 110.609 kb on + strand at 110.610 kb on - strand at 110.666 kb on + strand at 110.842 kb on + strand at 110.945 kb on + strand at 110.945 kb on + strand at 110.945 kb on + strand at 110.945 kb on + strand at 110.945 kb on + strand at 110.946 kb on - strand at 110.946 kb on - strand at 110.946 kb on - strand at 111.026 kb on + strand, within H281DRAFT_05358 at 111.123 kb on - strand, within H281DRAFT_05358 at 111.155 kb on + strand, within H281DRAFT_05358 at 111.156 kb on - strand, within H281DRAFT_05358 at 111.203 kb on + strand, within H281DRAFT_05358 at 111.204 kb on - strand, within H281DRAFT_05358 at 111.204 kb on - strand, within H281DRAFT_05358 at 111.204 kb on - strand, within H281DRAFT_05358 at 111.204 kb on - strand, within H281DRAFT_05358 at 111.267 kb on + strand, within H281DRAFT_05358 at 111.389 kb on + strand, within H281DRAFT_05358
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 108,557 + H281DRAFT_05355 0.48 +0.2 108,557 + H281DRAFT_05355 0.48 +0.7 108,558 - H281DRAFT_05355 0.48 -0.5 108,558 - H281DRAFT_05355 0.48 +0.7 108,558 - H281DRAFT_05355 0.48 -0.4 108,558 - H281DRAFT_05355 0.48 -0.2 108,562 - H281DRAFT_05355 0.48 +1.2 108,816 + H281DRAFT_05355 0.89 -0.1 108,816 + H281DRAFT_05355 0.89 +0.3 108,816 + H281DRAFT_05355 0.89 -0.6 108,846 + +0.2 108,846 + +0.1 108,869 + +0.1 108,870 - +0.8 109,040 + -0.1 109,094 + H281DRAFT_05356 0.20 -0.1 109,178 + H281DRAFT_05356 0.52 +0.3 109,179 - H281DRAFT_05356 0.52 +0.0 109,410 + -0.3 109,411 - +0.6 109,460 + -0.2 109,555 + -0.3 109,751 + H281DRAFT_05357 0.27 -1.0 109,752 - H281DRAFT_05357 0.27 -0.1 109,752 - H281DRAFT_05357 0.27 -0.1 109,952 - H281DRAFT_05357 0.49 +0.3 110,123 - H281DRAFT_05357 0.67 -0.4 110,497 + -0.2 110,529 - +0.2 110,532 + -0.7 110,533 - -0.9 110,609 + -0.6 110,610 - -1.0 110,666 + -0.1 110,842 + +0.1 110,945 + -0.5 110,945 + +0.9 110,945 + +0.3 110,945 + -0.6 110,945 + +0.1 110,946 - -0.3 110,946 - -0.9 110,946 - +0.3 111,026 + H281DRAFT_05358 0.12 +0.2 111,123 - H281DRAFT_05358 0.19 +1.0 111,155 + H281DRAFT_05358 0.21 +0.4 111,156 - H281DRAFT_05358 0.21 +0.1 111,203 + H281DRAFT_05358 0.24 -0.2 111,204 - H281DRAFT_05358 0.24 +0.7 111,204 - H281DRAFT_05358 0.24 -0.1 111,204 - H281DRAFT_05358 0.24 -0.1 111,204 - H281DRAFT_05358 0.24 -1.3 111,267 + H281DRAFT_05358 0.29 +0.4 111,389 + H281DRAFT_05358 0.37 +0.0
Or see this region's nucleotide sequence