Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05350 and H281DRAFT_05351 are separated by 27 nucleotides H281DRAFT_05351 and H281DRAFT_05352 are separated by 283 nucleotides
H281DRAFT_05350: H281DRAFT_05350 - Signal transduction histidine kinase, at 101,996 to 103,846
_05350
H281DRAFT_05351: H281DRAFT_05351 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 103,874 to 104,728
_05351
H281DRAFT_05352: H281DRAFT_05352 - serine/threonine-protein kinase HipA, at 105,012 to 106,352
_05352
Position (kb) 103
104
105 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 103.118 kb on + strand, within H281DRAFT_05350 at 103.180 kb on - strand, within H281DRAFT_05350 at 103.367 kb on - strand, within H281DRAFT_05350 at 103.367 kb on - strand, within H281DRAFT_05350 at 103.519 kb on + strand, within H281DRAFT_05350 at 103.776 kb on + strand at 103.791 kb on - strand at 103.954 kb on - strand at 104.301 kb on + strand, within H281DRAFT_05351 at 104.313 kb on + strand, within H281DRAFT_05351 at 104.526 kb on + strand, within H281DRAFT_05351 at 104.728 kb on + strand at 104.728 kb on + strand at 104.728 kb on + strand at 104.729 kb on - strand at 104.729 kb on - strand at 104.782 kb on - strand at 104.819 kb on - strand at 104.840 kb on - strand at 104.871 kb on - strand at 104.928 kb on - strand at 105.124 kb on - strand at 105.124 kb on - strand at 105.124 kb on - strand at 105.203 kb on + strand, within H281DRAFT_05352 at 105.204 kb on - strand, within H281DRAFT_05352 at 105.204 kb on - strand, within H281DRAFT_05352 at 105.300 kb on - strand at 105.556 kb on + strand, within H281DRAFT_05352 at 105.694 kb on + strand, within H281DRAFT_05352 at 105.695 kb on - strand, within H281DRAFT_05352 at 105.705 kb on + strand, within H281DRAFT_05352
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 103,118 + H281DRAFT_05350 0.61 +0.9 103,180 - H281DRAFT_05350 0.64 +0.5 103,367 - H281DRAFT_05350 0.74 +1.0 103,367 - H281DRAFT_05350 0.74 +1.4 103,519 + H281DRAFT_05350 0.82 -0.0 103,776 + +0.2 103,791 - +0.6 103,954 - +3.0 104,301 + H281DRAFT_05351 0.50 +0.1 104,313 + H281DRAFT_05351 0.51 +1.9 104,526 + H281DRAFT_05351 0.76 +0.6 104,728 + +1.1 104,728 + +1.5 104,728 + +0.6 104,729 - -1.1 104,729 - -1.2 104,782 - -0.9 104,819 - -0.8 104,840 - -2.0 104,871 - -0.7 104,928 - -0.5 105,124 - -0.8 105,124 - +0.6 105,124 - -0.1 105,203 + H281DRAFT_05352 0.14 -1.0 105,204 - H281DRAFT_05352 0.14 -1.2 105,204 - H281DRAFT_05352 0.14 +1.1 105,300 - -0.9 105,556 + H281DRAFT_05352 0.41 +0.5 105,694 + H281DRAFT_05352 0.51 +0.7 105,695 - H281DRAFT_05352 0.51 -0.8 105,705 + H281DRAFT_05352 0.52 -0.6
Or see this region's nucleotide sequence