Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05191 and H281DRAFT_05192 are separated by 146 nucleotides H281DRAFT_05192 and H281DRAFT_05193 are separated by 446 nucleotides
H281DRAFT_05191: H281DRAFT_05191 - Tetratricopeptide repeat-containing protein, at 147,576 to 148,811
_05191
H281DRAFT_05192: H281DRAFT_05192 - phage shock protein A (PspA) family protein, at 148,958 to 149,638
_05192
H281DRAFT_05193: H281DRAFT_05193 - hypothetical protein, at 150,085 to 150,717
_05193
Position (kb) 148
149
150 Strain fitness (log2 ratio) -2
-1
0
1
2 at 148.092 kb on + strand, within H281DRAFT_05191 at 148.167 kb on + strand, within H281DRAFT_05191 at 148.613 kb on - strand, within H281DRAFT_05191 at 148.618 kb on + strand, within H281DRAFT_05191 at 148.619 kb on - strand, within H281DRAFT_05191 at 148.750 kb on - strand at 148.750 kb on - strand at 149.428 kb on - strand, within H281DRAFT_05192 at 149.607 kb on - strand at 149.773 kb on + strand at 149.810 kb on + strand at 149.811 kb on - strand at 149.811 kb on - strand at 149.880 kb on + strand at 149.880 kb on + strand at 149.881 kb on - strand at 149.909 kb on - strand at 149.985 kb on - strand at 150.082 kb on + strand at 150.083 kb on - strand at 150.087 kb on - strand at 150.087 kb on - strand at 150.087 kb on - strand at 150.630 kb on + strand, within H281DRAFT_05193
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 148,092 + H281DRAFT_05191 0.42 +0.5 148,167 + H281DRAFT_05191 0.48 +0.4 148,613 - H281DRAFT_05191 0.84 +0.5 148,618 + H281DRAFT_05191 0.84 +0.1 148,619 - H281DRAFT_05191 0.84 +0.4 148,750 - -0.3 148,750 - +0.1 149,428 - H281DRAFT_05192 0.69 +0.6 149,607 - +0.4 149,773 + +0.7 149,810 + +0.0 149,811 - +0.5 149,811 - -0.2 149,880 + +0.1 149,880 + -0.2 149,881 - -0.1 149,909 - +0.6 149,985 - -0.8 150,082 + +0.2 150,083 - +0.4 150,087 - -0.2 150,087 - +0.0 150,087 - +1.8 150,630 + H281DRAFT_05193 0.86 -1.9
Or see this region's nucleotide sequence