Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05164 and H281DRAFT_05165 are separated by 69 nucleotides H281DRAFT_05165 and H281DRAFT_05166 are separated by 249 nucleotides
H281DRAFT_05164: H281DRAFT_05164 - Cytosine/adenosine deaminase, at 117,791 to 119,188
_05164
H281DRAFT_05165: H281DRAFT_05165 - transcriptional regulator, LysR family, at 119,258 to 120,190
_05165
H281DRAFT_05166: H281DRAFT_05166 - nucleoside ABC transporter ATP-binding protein, at 120,440 to 122,041
_05166
Position (kb)
119
120
121 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 118.362 kb on + strand, within H281DRAFT_05164 at 118.362 kb on + strand, within H281DRAFT_05164 at 118.363 kb on - strand, within H281DRAFT_05164 at 118.394 kb on + strand, within H281DRAFT_05164 at 118.395 kb on - strand, within H281DRAFT_05164 at 118.554 kb on - strand, within H281DRAFT_05164 at 118.555 kb on + strand, within H281DRAFT_05164 at 118.556 kb on - strand, within H281DRAFT_05164 at 118.715 kb on - strand, within H281DRAFT_05164 at 118.845 kb on + strand, within H281DRAFT_05164 at 119.071 kb on + strand at 119.172 kb on - strand at 119.245 kb on - strand at 119.245 kb on - strand at 119.355 kb on + strand, within H281DRAFT_05165 at 119.356 kb on - strand, within H281DRAFT_05165 at 119.419 kb on - strand, within H281DRAFT_05165 at 119.422 kb on - strand, within H281DRAFT_05165 at 119.494 kb on - strand, within H281DRAFT_05165 at 119.575 kb on - strand, within H281DRAFT_05165 at 119.621 kb on - strand, within H281DRAFT_05165 at 120.164 kb on - strand at 120.205 kb on - strand at 120.205 kb on - strand at 120.207 kb on - strand at 120.348 kb on - strand at 120.348 kb on - strand at 120.351 kb on + strand at 120.351 kb on + strand at 120.352 kb on - strand at 120.456 kb on - strand at 120.540 kb on - strand at 121.070 kb on + strand, within H281DRAFT_05166
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 118,362 + H281DRAFT_05164 0.41 +0.5 118,362 + H281DRAFT_05164 0.41 +1.1 118,363 - H281DRAFT_05164 0.41 -0.0 118,394 + H281DRAFT_05164 0.43 +0.3 118,395 - H281DRAFT_05164 0.43 +0.2 118,554 - H281DRAFT_05164 0.55 +0.1 118,555 + H281DRAFT_05164 0.55 +0.9 118,556 - H281DRAFT_05164 0.55 +0.8 118,715 - H281DRAFT_05164 0.66 -0.4 118,845 + H281DRAFT_05164 0.75 +0.6 119,071 + +1.2 119,172 - -1.4 119,245 - +0.8 119,245 - -0.7 119,355 + H281DRAFT_05165 0.10 -4.1 119,356 - H281DRAFT_05165 0.11 -0.9 119,419 - H281DRAFT_05165 0.17 -1.2 119,422 - H281DRAFT_05165 0.18 -1.0 119,494 - H281DRAFT_05165 0.25 -2.2 119,575 - H281DRAFT_05165 0.34 -0.3 119,621 - H281DRAFT_05165 0.39 -0.4 120,164 - -0.2 120,205 - -0.7 120,205 - -0.5 120,207 - -0.8 120,348 - -0.9 120,348 - -0.7 120,351 + +2.3 120,351 + +3.3 120,352 - -0.2 120,456 - -0.4 120,540 - +0.5 121,070 + H281DRAFT_05166 0.39 +1.2
Or see this region's nucleotide sequence