Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05087 and H281DRAFT_05088 are separated by 54 nucleotides H281DRAFT_05088 and H281DRAFT_05089 are separated by 4 nucleotides H281DRAFT_05089 and H281DRAFT_05090 overlap by 4 nucleotides
H281DRAFT_05087: H281DRAFT_05087 - exodeoxyribonuclease V alpha subunit, at 30,679 to 33,003
_05087
H281DRAFT_05088: H281DRAFT_05088 - hypothetical protein, at 33,058 to 33,201
_05088
H281DRAFT_05089: H281DRAFT_05089 - ribosome-associated protein, at 33,206 to 33,610
_05089
H281DRAFT_05090: H281DRAFT_05090 - EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant), at 33,607 to 34,932
_05090
Position (kb) 33
34 Strain fitness (log2 ratio) -1
0
1 at 33.019 kb on - strand at 33.176 kb on - strand, within H281DRAFT_05088 at 33.176 kb on - strand, within H281DRAFT_05088 at 33.199 kb on + strand at 33.200 kb on - strand at 33.543 kb on + strand, within H281DRAFT_05089 at 33.544 kb on - strand, within H281DRAFT_05089 at 33.608 kb on + strand at 33.725 kb on + strand at 33.725 kb on + strand at 33.726 kb on - strand at 33.726 kb on - strand at 34.076 kb on + strand, within H281DRAFT_05090
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 33,019 - -0.1 33,176 - H281DRAFT_05088 0.82 +0.0 33,176 - H281DRAFT_05088 0.82 +0.4 33,199 + -0.5 33,200 - -0.1 33,543 + H281DRAFT_05089 0.83 +0.5 33,544 - H281DRAFT_05089 0.83 +0.1 33,608 + -0.3 33,725 + -0.7 33,725 + -1.7 33,726 - +0.2 33,726 - +1.7 34,076 + H281DRAFT_05090 0.35 +0.0
Or see this region's nucleotide sequence