Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04956 and H281DRAFT_04957 are separated by 183 nucleotides H281DRAFT_04957 and H281DRAFT_04958 are separated by 148 nucleotides H281DRAFT_04958 and H281DRAFT_04959 are separated by 219 nucleotides H281DRAFT_04959 and H281DRAFT_04960 are separated by 290 nucleotides
H281DRAFT_04956: H281DRAFT_04956 - fumarase, class I, homodimeric, at 141,852 to 143,375
_04956
H281DRAFT_04957: H281DRAFT_04957 - bacterioferritin, at 143,559 to 144,038
_04957
H281DRAFT_04958: H281DRAFT_04958 - glutamate racemase, at 144,187 to 145,071
_04958
H281DRAFT_04959: H281DRAFT_04959 - bacterioferritin-associated ferredoxin, at 145,291 to 145,527
_04959
H281DRAFT_04960: H281DRAFT_04960 - outer membrane transport energization protein TonB (TC 2.C.1.1.1), at 145,818 to 146,552
_04960
Position (kb) 144
145
146 Strain fitness (log2 ratio) -1
0
1 at 143.393 kb on + strand at 143.394 kb on - strand at 143.587 kb on - strand at 143.631 kb on + strand, within H281DRAFT_04957 at 143.652 kb on + strand, within H281DRAFT_04957 at 143.652 kb on + strand, within H281DRAFT_04957 at 143.653 kb on - strand, within H281DRAFT_04957 at 143.654 kb on + strand, within H281DRAFT_04957 at 144.003 kb on + strand at 144.003 kb on + strand at 144.095 kb on - strand at 144.124 kb on + strand at 144.125 kb on - strand at 144.125 kb on - strand at 144.335 kb on - strand, within H281DRAFT_04958 at 144.460 kb on - strand, within H281DRAFT_04958 at 144.631 kb on + strand, within H281DRAFT_04958 at 144.736 kb on + strand, within H281DRAFT_04958 at 144.949 kb on + strand, within H281DRAFT_04958 at 144.950 kb on - strand, within H281DRAFT_04958 at 145.160 kb on + strand at 145.190 kb on + strand at 145.191 kb on - strand at 145.277 kb on + strand at 145.742 kb on + strand at 145.742 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 143,393 + -0.9 143,394 - -0.0 143,587 - +0.8 143,631 + H281DRAFT_04957 0.15 -0.4 143,652 + H281DRAFT_04957 0.19 -0.5 143,652 + H281DRAFT_04957 0.19 +0.0 143,653 - H281DRAFT_04957 0.20 -0.4 143,654 + H281DRAFT_04957 0.20 +0.6 144,003 + +0.8 144,003 + +0.1 144,095 - +0.4 144,124 + +0.3 144,125 - +0.0 144,125 - +0.1 144,335 - H281DRAFT_04958 0.17 +1.4 144,460 - H281DRAFT_04958 0.31 +1.5 144,631 + H281DRAFT_04958 0.50 +1.3 144,736 + H281DRAFT_04958 0.62 -0.1 144,949 + H281DRAFT_04958 0.86 -1.4 144,950 - H281DRAFT_04958 0.86 +0.2 145,160 + +0.7 145,190 + +1.7 145,191 - -1.2 145,277 + +0.8 145,742 + -0.6 145,742 + -0.0
Or see this region's nucleotide sequence