Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04953 and H281DRAFT_04954 are separated by 358 nucleotides H281DRAFT_04954 and H281DRAFT_04955 are separated by 275 nucleotides H281DRAFT_04955 and H281DRAFT_04956 are separated by 52 nucleotides
H281DRAFT_04953: H281DRAFT_04953 - acetyl-coenzyme A synthetase, at 137,723 to 139,705
_04953
H281DRAFT_04954: H281DRAFT_04954 - Threonine/homoserine efflux transporter RhtA, at 140,064 to 140,957
_04954
H281DRAFT_04955: H281DRAFT_04955 - TIGR00645 family protein, at 141,233 to 141,799
_04955
H281DRAFT_04956: H281DRAFT_04956 - fumarase, class I, homodimeric, at 141,852 to 143,375
_04956
Position (kb)
140
141 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 139.273 kb on + strand, within H281DRAFT_04953 at 139.275 kb on + strand, within H281DRAFT_04953 at 139.275 kb on + strand, within H281DRAFT_04953 at 139.276 kb on - strand, within H281DRAFT_04953 at 139.359 kb on + strand, within H281DRAFT_04953 at 139.359 kb on + strand, within H281DRAFT_04953 at 139.359 kb on + strand, within H281DRAFT_04953 at 139.360 kb on - strand, within H281DRAFT_04953 at 139.453 kb on - strand, within H281DRAFT_04953 at 139.489 kb on - strand, within H281DRAFT_04953 at 139.579 kb on - strand at 139.611 kb on + strand at 139.612 kb on - strand at 139.932 kb on + strand at 139.957 kb on + strand at 139.958 kb on - strand at 140.003 kb on + strand at 140.004 kb on - strand at 140.025 kb on + strand at 140.028 kb on + strand at 140.028 kb on + strand at 140.029 kb on - strand at 140.029 kb on - strand at 140.037 kb on - strand at 140.037 kb on - strand at 140.045 kb on + strand at 140.046 kb on - strand at 140.130 kb on - strand at 140.393 kb on + strand, within H281DRAFT_04954 at 140.556 kb on + strand, within H281DRAFT_04954 at 140.556 kb on + strand, within H281DRAFT_04954 at 140.556 kb on + strand, within H281DRAFT_04954 at 140.556 kb on + strand, within H281DRAFT_04954 at 140.556 kb on + strand, within H281DRAFT_04954 at 140.557 kb on - strand, within H281DRAFT_04954 at 140.598 kb on - strand, within H281DRAFT_04954 at 140.729 kb on - strand, within H281DRAFT_04954 at 140.836 kb on - strand, within H281DRAFT_04954 at 140.955 kb on + strand at 140.956 kb on - strand at 140.956 kb on - strand at 141.010 kb on + strand at 141.011 kb on - strand at 141.011 kb on - strand at 141.605 kb on - strand, within H281DRAFT_04955 at 141.906 kb on + strand at 141.907 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 139,273 + H281DRAFT_04953 0.78 -0.8 139,275 + H281DRAFT_04953 0.78 -3.4 139,275 + H281DRAFT_04953 0.78 -1.3 139,276 - H281DRAFT_04953 0.78 -1.2 139,359 + H281DRAFT_04953 0.83 -2.9 139,359 + H281DRAFT_04953 0.83 -1.5 139,359 + H281DRAFT_04953 0.83 -1.7 139,360 - H281DRAFT_04953 0.83 -1.8 139,453 - H281DRAFT_04953 0.87 -1.3 139,489 - H281DRAFT_04953 0.89 -0.4 139,579 - +0.5 139,611 + -2.0 139,612 - -2.3 139,932 + +1.1 139,957 + -1.5 139,958 - +0.5 140,003 + -1.1 140,004 - +0.3 140,025 + -0.6 140,028 + -0.6 140,028 + +0.5 140,029 - -0.4 140,029 - +0.1 140,037 - +0.0 140,037 - -0.3 140,045 + -0.3 140,046 - +0.4 140,130 - -0.2 140,393 + H281DRAFT_04954 0.37 -0.6 140,556 + H281DRAFT_04954 0.55 -0.2 140,556 + H281DRAFT_04954 0.55 +0.3 140,556 + H281DRAFT_04954 0.55 +0.5 140,556 + H281DRAFT_04954 0.55 -1.3 140,556 + H281DRAFT_04954 0.55 -0.2 140,557 - H281DRAFT_04954 0.55 +0.8 140,598 - H281DRAFT_04954 0.60 +0.0 140,729 - H281DRAFT_04954 0.74 -0.2 140,836 - H281DRAFT_04954 0.86 -0.2 140,955 + +0.4 140,956 - +0.1 140,956 - +0.3 141,010 + +0.5 141,011 - +0.9 141,011 - +0.2 141,605 - H281DRAFT_04955 0.66 +3.8 141,906 + +1.6 141,907 - +1.1
Or see this region's nucleotide sequence