Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04949 and H281DRAFT_04950 are separated by 285 nucleotides H281DRAFT_04950 and H281DRAFT_04951 are separated by 60 nucleotides
H281DRAFT_04949: H281DRAFT_04949 - putative spermidine/putrescine transport system permease protein, at 133,872 to 134,699
_04949
H281DRAFT_04950: H281DRAFT_04950 - tRNA_Ser_GGA, at 134,985 to 135,075
_04950
H281DRAFT_04951: H281DRAFT_04951 - cation/acetate symporter, at 135,136 to 137,154
_04951
Position (kb) 134
135
136 Strain fitness (log2 ratio) -1
0
1 at 134.648 kb on + strand at 134.651 kb on + strand at 134.652 kb on - strand at 134.652 kb on - strand at 134.652 kb on - strand at 134.682 kb on - strand at 134.682 kb on - strand at 134.706 kb on - strand at 134.706 kb on - strand at 134.706 kb on - strand at 134.724 kb on + strand at 134.724 kb on + strand at 134.918 kb on - strand at 134.918 kb on - strand at 135.138 kb on - strand at 135.152 kb on + strand at 135.152 kb on + strand at 135.152 kb on + strand at 135.153 kb on - strand at 135.171 kb on + strand at 135.172 kb on - strand at 135.172 kb on - strand at 135.203 kb on - strand at 135.329 kb on + strand at 135.332 kb on + strand at 135.332 kb on + strand at 135.332 kb on + strand at 135.332 kb on + strand at 135.497 kb on + strand, within H281DRAFT_04951 at 135.497 kb on + strand, within H281DRAFT_04951 at 135.585 kb on - strand, within H281DRAFT_04951 at 135.585 kb on - strand, within H281DRAFT_04951 at 135.585 kb on - strand, within H281DRAFT_04951 at 135.587 kb on + strand, within H281DRAFT_04951 at 135.587 kb on + strand, within H281DRAFT_04951 at 135.587 kb on + strand, within H281DRAFT_04951 at 135.587 kb on + strand, within H281DRAFT_04951 at 135.918 kb on - strand, within H281DRAFT_04951 at 135.989 kb on + strand, within H281DRAFT_04951 at 135.989 kb on + strand, within H281DRAFT_04951 at 135.989 kb on + strand, within H281DRAFT_04951 at 135.989 kb on + strand, within H281DRAFT_04951 at 135.990 kb on - strand, within H281DRAFT_04951 at 136.002 kb on + strand, within H281DRAFT_04951 at 136.039 kb on + strand, within H281DRAFT_04951 at 136.040 kb on - strand, within H281DRAFT_04951
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 134,648 + +0.7 134,651 + +0.6 134,652 - -0.3 134,652 - +0.5 134,652 - +0.6 134,682 - -0.3 134,682 - -0.3 134,706 - -0.9 134,706 - +0.2 134,706 - -0.3 134,724 + +0.9 134,724 + -0.1 134,918 - -0.1 134,918 - +0.5 135,138 - -0.4 135,152 + -0.3 135,152 + -0.2 135,152 + -0.7 135,153 - -0.5 135,171 + -0.3 135,172 - -1.0 135,172 - +0.0 135,203 - +1.1 135,329 + +0.0 135,332 + -0.2 135,332 + -0.2 135,332 + +0.3 135,332 + -0.5 135,497 + H281DRAFT_04951 0.18 +0.5 135,497 + H281DRAFT_04951 0.18 -0.9 135,585 - H281DRAFT_04951 0.22 +0.1 135,585 - H281DRAFT_04951 0.22 +0.3 135,585 - H281DRAFT_04951 0.22 -0.1 135,587 + H281DRAFT_04951 0.22 +0.4 135,587 + H281DRAFT_04951 0.22 +0.8 135,587 + H281DRAFT_04951 0.22 -0.2 135,587 + H281DRAFT_04951 0.22 -0.4 135,918 - H281DRAFT_04951 0.39 +0.8 135,989 + H281DRAFT_04951 0.42 -0.9 135,989 + H281DRAFT_04951 0.42 +0.0 135,989 + H281DRAFT_04951 0.42 +0.1 135,989 + H281DRAFT_04951 0.42 +0.6 135,990 - H281DRAFT_04951 0.42 -0.0 136,002 + H281DRAFT_04951 0.43 +0.1 136,039 + H281DRAFT_04951 0.45 +0.2 136,040 - H281DRAFT_04951 0.45 -0.3
Or see this region's nucleotide sequence