Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04779 and H281DRAFT_04780 are separated by 31 nucleotides H281DRAFT_04780 and H281DRAFT_04781 are separated by 183 nucleotides H281DRAFT_04781 and H281DRAFT_04782 are separated by 169 nucleotides
H281DRAFT_04779: H281DRAFT_04779 - colanic acid biosynthesis glycosyl transferase WcaI, at 200,838 to 202,169
_04779
H281DRAFT_04780: H281DRAFT_04780 - hypothetical protein, at 202,201 to 202,695
_04780
H281DRAFT_04781: H281DRAFT_04781 - putative colanic acid biosynthesis acetyltransferase WcaF, at 202,879 to 203,493
_04781
H281DRAFT_04782: H281DRAFT_04782 - Choline dehydrogenase, at 203,663 to 205,396
_04782
Position (kb) 202
203
204 Strain fitness (log2 ratio) -1
0
1 at 202.022 kb on + strand, within H281DRAFT_04779 at 202.023 kb on - strand, within H281DRAFT_04779 at 202.142 kb on + strand at 202.253 kb on + strand, within H281DRAFT_04780 at 202.254 kb on - strand, within H281DRAFT_04780 at 202.675 kb on - strand at 202.710 kb on + strand at 202.711 kb on - strand at 202.845 kb on - strand at 203.010 kb on - strand, within H281DRAFT_04781 at 203.782 kb on + strand at 204.018 kb on - strand, within H281DRAFT_04782 at 204.020 kb on + strand, within H281DRAFT_04782 at 204.020 kb on + strand, within H281DRAFT_04782 at 204.021 kb on - strand, within H281DRAFT_04782 at 204.021 kb on - strand, within H281DRAFT_04782 at 204.186 kb on - strand, within H281DRAFT_04782 at 204.208 kb on + strand, within H281DRAFT_04782 at 204.438 kb on - strand, within H281DRAFT_04782 at 204.438 kb on - strand, within H281DRAFT_04782
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 202,022 + H281DRAFT_04779 0.89 +0.5 202,023 - H281DRAFT_04779 0.89 +0.5 202,142 + +0.7 202,253 + H281DRAFT_04780 0.11 -0.5 202,254 - H281DRAFT_04780 0.11 +1.0 202,675 - +1.5 202,710 + +1.4 202,711 - -0.1 202,845 - +0.0 203,010 - H281DRAFT_04781 0.21 +0.6 203,782 + -0.5 204,018 - H281DRAFT_04782 0.20 +0.0 204,020 + H281DRAFT_04782 0.21 -0.7 204,020 + H281DRAFT_04782 0.21 -0.4 204,021 - H281DRAFT_04782 0.21 +0.2 204,021 - H281DRAFT_04782 0.21 -0.1 204,186 - H281DRAFT_04782 0.30 +1.0 204,208 + H281DRAFT_04782 0.31 -0.3 204,438 - H281DRAFT_04782 0.45 +0.1 204,438 - H281DRAFT_04782 0.45 +0.3
Or see this region's nucleotide sequence