Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04753 and H281DRAFT_04754 are separated by 6 nucleotides H281DRAFT_04754 and H281DRAFT_04755 are separated by 153 nucleotides H281DRAFT_04755 and H281DRAFT_04756 are separated by 208 nucleotides H281DRAFT_04756 and H281DRAFT_04757 are separated by 99 nucleotides
H281DRAFT_04753: H281DRAFT_04753 - xanthine dehydrogenase, molybdenum binding subunit apoprotein, at 167,056 to 169,419
_04753
H281DRAFT_04754: H281DRAFT_04754 - xanthine dehydrogenase accessory protein XdhC, at 169,426 to 170,025
_04754
H281DRAFT_04755: H281DRAFT_04755 - transcriptional regulator, LysR family, at 170,179 to 171,144
_04755
H281DRAFT_04756: H281DRAFT_04756 - 2-hydroxychromene-2-carboxylate isomerase, at 171,353 to 171,997
_04756
H281DRAFT_04757: H281DRAFT_04757 - TRAP-type uncharacterized transport system, substrate-binding protein, at 172,097 to 173,596
_04757
Position (kb) 170
171
172 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 169.418 kb on - strand at 169.545 kb on + strand, within H281DRAFT_04754 at 169.545 kb on + strand, within H281DRAFT_04754 at 169.546 kb on - strand, within H281DRAFT_04754 at 169.768 kb on + strand, within H281DRAFT_04754 at 169.768 kb on + strand, within H281DRAFT_04754 at 169.835 kb on + strand, within H281DRAFT_04754 at 169.836 kb on - strand, within H281DRAFT_04754 at 170.084 kb on - strand at 170.375 kb on + strand, within H281DRAFT_04755 at 170.451 kb on - strand, within H281DRAFT_04755 at 170.532 kb on - strand, within H281DRAFT_04755 at 171.218 kb on + strand at 171.218 kb on + strand at 171.236 kb on + strand at 171.236 kb on + strand at 171.238 kb on + strand at 171.238 kb on + strand at 171.239 kb on - strand at 171.282 kb on + strand at 171.283 kb on - strand at 171.435 kb on + strand, within H281DRAFT_04756 at 171.436 kb on - strand, within H281DRAFT_04756 at 171.436 kb on - strand, within H281DRAFT_04756 at 171.504 kb on + strand, within H281DRAFT_04756 at 171.505 kb on - strand, within H281DRAFT_04756 at 171.591 kb on - strand, within H281DRAFT_04756 at 171.759 kb on + strand, within H281DRAFT_04756 at 171.765 kb on - strand, within H281DRAFT_04756 at 171.933 kb on + strand at 171.933 kb on + strand at 171.934 kb on - strand at 171.958 kb on - strand at 171.997 kb on + strand at 171.997 kb on + strand at 171.997 kb on + strand at 171.997 kb on + strand at 171.997 kb on + strand at 171.997 kb on + strand at 171.998 kb on - strand at 171.998 kb on - strand at 171.998 kb on - strand at 171.998 kb on - strand at 172.070 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 169,418 - +0.3 169,545 + H281DRAFT_04754 0.20 -0.5 169,545 + H281DRAFT_04754 0.20 -1.0 169,546 - H281DRAFT_04754 0.20 -2.1 169,768 + H281DRAFT_04754 0.57 +0.0 169,768 + H281DRAFT_04754 0.57 -0.2 169,835 + H281DRAFT_04754 0.68 -0.3 169,836 - H281DRAFT_04754 0.68 +1.5 170,084 - -0.3 170,375 + H281DRAFT_04755 0.20 -0.4 170,451 - H281DRAFT_04755 0.28 -1.1 170,532 - H281DRAFT_04755 0.37 -0.6 171,218 + -0.8 171,218 + +1.0 171,236 + -1.3 171,236 + -0.0 171,238 + +0.7 171,238 + -0.2 171,239 - -1.2 171,282 + -0.3 171,283 - +0.0 171,435 + H281DRAFT_04756 0.13 -0.4 171,436 - H281DRAFT_04756 0.13 +1.3 171,436 - H281DRAFT_04756 0.13 -3.0 171,504 + H281DRAFT_04756 0.23 -0.2 171,505 - H281DRAFT_04756 0.24 +1.8 171,591 - H281DRAFT_04756 0.37 +0.9 171,759 + H281DRAFT_04756 0.63 -0.8 171,765 - H281DRAFT_04756 0.64 +0.1 171,933 + +0.2 171,933 + -0.1 171,934 - +0.8 171,958 - +0.4 171,997 + -0.5 171,997 + +2.0 171,997 + +0.1 171,997 + -0.5 171,997 + +0.7 171,997 + -0.5 171,998 - -0.3 171,998 - -0.9 171,998 - -0.5 171,998 - +0.2 172,070 + -0.6
Or see this region's nucleotide sequence