Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04678 and H281DRAFT_04679 are separated by 136 nucleotides H281DRAFT_04679 and H281DRAFT_04680 are separated by 144 nucleotides H281DRAFT_04680 and H281DRAFT_04681 are separated by 37 nucleotides
H281DRAFT_04678: H281DRAFT_04678 - 4-hydroxybenzoate polyprenyltransferase, at 81,715 to 82,578
_04678
H281DRAFT_04679: H281DRAFT_04679 - pyrroline-5-carboxylate reductase, at 82,715 to 83,530
_04679
H281DRAFT_04680: H281DRAFT_04680 - hypothetical protein, at 83,675 to 84,373
_04680
H281DRAFT_04681: H281DRAFT_04681 - glycolate oxidase iron-sulfur subunit, at 84,411 to 85,637
_04681
Position (kb) 82
83
84 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 82.559 kb on - strand at 82.559 kb on - strand at 82.682 kb on + strand at 82.716 kb on + strand at 82.716 kb on + strand at 82.717 kb on - strand at 82.995 kb on + strand, within H281DRAFT_04679 at 82.996 kb on - strand, within H281DRAFT_04679 at 83.005 kb on - strand, within H281DRAFT_04679 at 83.066 kb on + strand, within H281DRAFT_04679 at 83.067 kb on - strand, within H281DRAFT_04679 at 83.203 kb on + strand, within H281DRAFT_04679 at 83.204 kb on - strand, within H281DRAFT_04679 at 83.349 kb on + strand, within H281DRAFT_04679 at 83.349 kb on + strand, within H281DRAFT_04679 at 83.349 kb on + strand, within H281DRAFT_04679 at 83.350 kb on - strand, within H281DRAFT_04679 at 83.350 kb on - strand, within H281DRAFT_04679 at 83.557 kb on + strand at 83.557 kb on + strand at 83.558 kb on - strand at 83.558 kb on - strand at 83.572 kb on - strand at 83.686 kb on - strand at 83.782 kb on + strand, within H281DRAFT_04680 at 84.202 kb on - strand, within H281DRAFT_04680 at 84.488 kb on + strand at 84.489 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 82,559 - +0.2 82,559 - -0.0 82,682 + +2.2 82,716 + -0.1 82,716 + +0.2 82,717 - +0.3 82,995 + H281DRAFT_04679 0.34 -0.0 82,996 - H281DRAFT_04679 0.34 -3.0 83,005 - H281DRAFT_04679 0.36 -4.4 83,066 + H281DRAFT_04679 0.43 -2.4 83,067 - H281DRAFT_04679 0.43 -4.5 83,203 + H281DRAFT_04679 0.60 -4.0 83,204 - H281DRAFT_04679 0.60 -2.9 83,349 + H281DRAFT_04679 0.78 -3.9 83,349 + H281DRAFT_04679 0.78 -3.6 83,349 + H281DRAFT_04679 0.78 -0.0 83,350 - H281DRAFT_04679 0.78 -3.3 83,350 - H281DRAFT_04679 0.78 -3.4 83,557 + +0.7 83,557 + -0.2 83,558 - +0.0 83,558 - +0.3 83,572 - -0.0 83,686 - +0.4 83,782 + H281DRAFT_04680 0.15 +0.2 84,202 - H281DRAFT_04680 0.75 +0.1 84,488 + -0.0 84,489 - -0.2
Or see this region's nucleotide sequence