Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04675 and H281DRAFT_04676 are separated by 77 nucleotides H281DRAFT_04676 and H281DRAFT_04677 are separated by 274 nucleotides H281DRAFT_04677 and H281DRAFT_04678 are separated by 291 nucleotides
H281DRAFT_04675: H281DRAFT_04675 - catalase, at 78,967 to 80,421
_04675
H281DRAFT_04676: H281DRAFT_04676 - hypothetical protein, at 80,499 to 80,660
_04676
H281DRAFT_04677: H281DRAFT_04677 - starvation-inducible DNA-binding protein, at 80,935 to 81,423
_04677
H281DRAFT_04678: H281DRAFT_04678 - 4-hydroxybenzoate polyprenyltransferase, at 81,715 to 82,578
_04678
Position (kb) 80
81
82 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 80.082 kb on + strand, within H281DRAFT_04675 at 80.114 kb on - strand, within H281DRAFT_04675 at 80.218 kb on + strand, within H281DRAFT_04675 at 80.219 kb on - strand, within H281DRAFT_04675 at 80.221 kb on + strand, within H281DRAFT_04675 at 80.221 kb on + strand, within H281DRAFT_04675 at 80.222 kb on - strand, within H281DRAFT_04675 at 80.366 kb on - strand at 80.419 kb on + strand at 80.562 kb on + strand, within H281DRAFT_04676 at 80.563 kb on - strand, within H281DRAFT_04676 at 80.563 kb on - strand, within H281DRAFT_04676 at 80.784 kb on + strand at 80.836 kb on + strand at 80.837 kb on - strand at 80.837 kb on - strand at 80.895 kb on - strand at 80.912 kb on + strand at 80.913 kb on - strand at 80.913 kb on - strand at 80.955 kb on - strand at 80.955 kb on - strand at 80.968 kb on - strand at 81.034 kb on + strand, within H281DRAFT_04677 at 81.034 kb on + strand, within H281DRAFT_04677 at 81.034 kb on + strand, within H281DRAFT_04677 at 81.034 kb on + strand, within H281DRAFT_04677 at 81.034 kb on + strand, within H281DRAFT_04677 at 81.035 kb on - strand, within H281DRAFT_04677 at 81.035 kb on - strand, within H281DRAFT_04677 at 81.035 kb on - strand, within H281DRAFT_04677 at 81.036 kb on + strand, within H281DRAFT_04677 at 81.036 kb on + strand, within H281DRAFT_04677 at 81.036 kb on + strand, within H281DRAFT_04677 at 81.036 kb on + strand, within H281DRAFT_04677 at 81.037 kb on - strand, within H281DRAFT_04677 at 81.122 kb on - strand, within H281DRAFT_04677 at 81.196 kb on + strand, within H281DRAFT_04677 at 81.197 kb on - strand, within H281DRAFT_04677 at 81.197 kb on - strand, within H281DRAFT_04677 at 81.197 kb on - strand, within H281DRAFT_04677 at 81.197 kb on - strand, within H281DRAFT_04677 at 81.197 kb on - strand, within H281DRAFT_04677 at 81.301 kb on - strand, within H281DRAFT_04677 at 81.702 kb on + strand at 81.702 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 80,082 + H281DRAFT_04675 0.77 -2.4 80,114 - H281DRAFT_04675 0.79 +0.2 80,218 + H281DRAFT_04675 0.86 +0.7 80,219 - H281DRAFT_04675 0.86 -0.8 80,221 + H281DRAFT_04675 0.86 +0.4 80,221 + H281DRAFT_04675 0.86 -0.6 80,222 - H281DRAFT_04675 0.86 -0.1 80,366 - -0.7 80,419 + +1.0 80,562 + H281DRAFT_04676 0.39 +0.2 80,563 - H281DRAFT_04676 0.40 -1.2 80,563 - H281DRAFT_04676 0.40 -0.1 80,784 + -0.0 80,836 + +0.2 80,837 - -0.6 80,837 - -1.3 80,895 - -4.6 80,912 + +0.1 80,913 - -1.7 80,913 - -3.2 80,955 - -3.3 80,955 - -0.0 80,968 - -2.0 81,034 + H281DRAFT_04677 0.20 -5.6 81,034 + H281DRAFT_04677 0.20 -4.7 81,034 + H281DRAFT_04677 0.20 -4.0 81,034 + H281DRAFT_04677 0.20 -3.3 81,034 + H281DRAFT_04677 0.20 -4.3 81,035 - H281DRAFT_04677 0.20 -3.3 81,035 - H281DRAFT_04677 0.20 -5.1 81,035 - H281DRAFT_04677 0.20 -4.7 81,036 + H281DRAFT_04677 0.21 -3.3 81,036 + H281DRAFT_04677 0.21 -3.4 81,036 + H281DRAFT_04677 0.21 -4.7 81,036 + H281DRAFT_04677 0.21 -4.7 81,037 - H281DRAFT_04677 0.21 -3.5 81,122 - H281DRAFT_04677 0.38 -2.5 81,196 + H281DRAFT_04677 0.53 -2.4 81,197 - H281DRAFT_04677 0.54 -2.9 81,197 - H281DRAFT_04677 0.54 -3.2 81,197 - H281DRAFT_04677 0.54 -3.9 81,197 - H281DRAFT_04677 0.54 -5.5 81,197 - H281DRAFT_04677 0.54 -4.5 81,301 - H281DRAFT_04677 0.75 -3.0 81,702 + +0.0 81,702 + -0.9
Or see this region's nucleotide sequence