Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04622 and H281DRAFT_04623 are separated by 356 nucleotides H281DRAFT_04623 and H281DRAFT_04624 are separated by 117 nucleotides
H281DRAFT_04622: H281DRAFT_04622 - putative cardiolipin synthase, at 16,070 to 17,329
_04622
H281DRAFT_04623: H281DRAFT_04623 - transcriptional regulator, TetR family, at 17,686 to 18,285
_04623
H281DRAFT_04624: H281DRAFT_04624 - hypothetical protein, at 18,403 to 20,190
_04624
Position (kb) 17
18
19 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 16.817 kb on + strand, within H281DRAFT_04622 at 16.818 kb on - strand, within H281DRAFT_04622 at 16.868 kb on + strand, within H281DRAFT_04622 at 16.869 kb on - strand, within H281DRAFT_04622 at 16.907 kb on + strand, within H281DRAFT_04622 at 16.907 kb on + strand, within H281DRAFT_04622 at 16.907 kb on + strand, within H281DRAFT_04622 at 16.907 kb on + strand, within H281DRAFT_04622 at 16.908 kb on - strand, within H281DRAFT_04622 at 16.992 kb on - strand, within H281DRAFT_04622 at 17.128 kb on + strand, within H281DRAFT_04622 at 17.128 kb on + strand, within H281DRAFT_04622 at 17.137 kb on + strand, within H281DRAFT_04622 at 17.137 kb on + strand, within H281DRAFT_04622 at 17.231 kb on + strand at 17.232 kb on - strand at 17.232 kb on - strand at 17.232 kb on - strand at 17.276 kb on + strand at 17.286 kb on - strand at 17.435 kb on + strand at 17.583 kb on - strand at 17.599 kb on + strand at 17.599 kb on + strand at 17.599 kb on + strand at 17.600 kb on - strand at 17.600 kb on - strand at 17.669 kb on + strand at 17.669 kb on + strand at 17.669 kb on + strand at 17.670 kb on - strand at 17.670 kb on - strand at 17.670 kb on - strand at 17.670 kb on - strand at 17.670 kb on - strand at 17.677 kb on + strand at 17.866 kb on + strand, within H281DRAFT_04623 at 17.866 kb on + strand, within H281DRAFT_04623 at 17.866 kb on + strand, within H281DRAFT_04623 at 17.867 kb on - strand, within H281DRAFT_04623 at 17.867 kb on - strand, within H281DRAFT_04623 at 17.995 kb on + strand, within H281DRAFT_04623 at 17.996 kb on - strand, within H281DRAFT_04623 at 18.017 kb on - strand, within H281DRAFT_04623 at 18.413 kb on - strand at 18.604 kb on + strand, within H281DRAFT_04624 at 18.604 kb on + strand, within H281DRAFT_04624 at 18.604 kb on + strand, within H281DRAFT_04624 at 18.605 kb on - strand, within H281DRAFT_04624 at 18.653 kb on - strand, within H281DRAFT_04624 at 18.653 kb on - strand, within H281DRAFT_04624 at 18.661 kb on + strand, within H281DRAFT_04624 at 18.661 kb on + strand, within H281DRAFT_04624 at 18.661 kb on + strand, within H281DRAFT_04624 at 18.745 kb on + strand, within H281DRAFT_04624 at 18.746 kb on - strand, within H281DRAFT_04624 at 18.785 kb on - strand, within H281DRAFT_04624 at 18.785 kb on - strand, within H281DRAFT_04624 at 18.878 kb on + strand, within H281DRAFT_04624 at 18.879 kb on - strand, within H281DRAFT_04624 at 18.970 kb on + strand, within H281DRAFT_04624 at 19.214 kb on + strand, within H281DRAFT_04624 at 19.214 kb on + strand, within H281DRAFT_04624 at 19.215 kb on - strand, within H281DRAFT_04624
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 16,817 + H281DRAFT_04622 0.59 +0.4 16,818 - H281DRAFT_04622 0.59 -0.1 16,868 + H281DRAFT_04622 0.63 +3.8 16,869 - H281DRAFT_04622 0.63 -0.6 16,907 + H281DRAFT_04622 0.66 +0.5 16,907 + H281DRAFT_04622 0.66 +0.2 16,907 + H281DRAFT_04622 0.66 -0.5 16,907 + H281DRAFT_04622 0.66 +0.4 16,908 - H281DRAFT_04622 0.67 +0.8 16,992 - H281DRAFT_04622 0.73 +0.9 17,128 + H281DRAFT_04622 0.84 -0.3 17,128 + H281DRAFT_04622 0.84 -0.8 17,137 + H281DRAFT_04622 0.85 +0.2 17,137 + H281DRAFT_04622 0.85 +0.2 17,231 + +1.4 17,232 - -0.2 17,232 - +0.1 17,232 - -1.3 17,276 + -0.3 17,286 - +0.7 17,435 + +1.0 17,583 - +0.3 17,599 + +0.2 17,599 + +0.8 17,599 + +1.0 17,600 - +0.2 17,600 - +0.5 17,669 + -0.2 17,669 + +0.0 17,669 + -0.1 17,670 - -0.0 17,670 - +0.2 17,670 - +1.4 17,670 - +0.4 17,670 - -0.2 17,677 + -0.2 17,866 + H281DRAFT_04623 0.30 -2.4 17,866 + H281DRAFT_04623 0.30 -0.0 17,866 + H281DRAFT_04623 0.30 -0.9 17,867 - H281DRAFT_04623 0.30 -3.7 17,867 - H281DRAFT_04623 0.30 -0.6 17,995 + H281DRAFT_04623 0.52 -0.5 17,996 - H281DRAFT_04623 0.52 -2.4 18,017 - H281DRAFT_04623 0.55 -0.3 18,413 - -0.2 18,604 + H281DRAFT_04624 0.11 +0.2 18,604 + H281DRAFT_04624 0.11 -0.5 18,604 + H281DRAFT_04624 0.11 -0.7 18,605 - H281DRAFT_04624 0.11 -0.2 18,653 - H281DRAFT_04624 0.14 -0.6 18,653 - H281DRAFT_04624 0.14 +0.2 18,661 + H281DRAFT_04624 0.14 +0.4 18,661 + H281DRAFT_04624 0.14 -0.0 18,661 + H281DRAFT_04624 0.14 -0.0 18,745 + H281DRAFT_04624 0.19 +0.6 18,746 - H281DRAFT_04624 0.19 +0.4 18,785 - H281DRAFT_04624 0.21 -0.3 18,785 - H281DRAFT_04624 0.21 -0.9 18,878 + H281DRAFT_04624 0.27 -0.7 18,879 - H281DRAFT_04624 0.27 +1.0 18,970 + H281DRAFT_04624 0.32 -0.5 19,214 + H281DRAFT_04624 0.45 -0.9 19,214 + H281DRAFT_04624 0.45 +0.5 19,215 - H281DRAFT_04624 0.45 +0.1
Or see this region's nucleotide sequence