Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04606 and H281DRAFT_04607 are separated by 106 nucleotides H281DRAFT_04607 and H281DRAFT_04608 are separated by 37 nucleotides H281DRAFT_04608 and H281DRAFT_04609 are separated by 38 nucleotides H281DRAFT_04609 and H281DRAFT_04610 are separated by 494 nucleotides
H281DRAFT_04606: H281DRAFT_04606 - threonine ammonia-lyase, biosynthetic, long form, at 3 to 782
_04606
H281DRAFT_04607: H281DRAFT_04607 - hypothetical protein, at 889 to 1,260
_04607
H281DRAFT_04608: H281DRAFT_04608 - hypothetical protein, at 1,298 to 1,474
_04608
H281DRAFT_04609: H281DRAFT_04609 - hypothetical protein, at 1,513 to 1,731
_04609
H281DRAFT_04610: H281DRAFT_04610 - Fe-S oxidoreductase, at 2,226 to 6,320
_04610
Position (kb)
1
2 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 0.736 kb on + strand at 0.766 kb on + strand at 0.766 kb on + strand at 0.898 kb on - strand at 1.025 kb on + strand, within H281DRAFT_04607 at 1.026 kb on - strand, within H281DRAFT_04607 at 1.164 kb on + strand, within H281DRAFT_04607 at 1.699 kb on - strand, within H281DRAFT_04609 at 1.844 kb on + strand at 2.078 kb on + strand at 2.078 kb on + strand at 2.079 kb on - strand at 2.311 kb on - strand at 2.316 kb on + strand at 2.316 kb on + strand at 2.317 kb on - strand at 2.317 kb on - strand at 2.356 kb on + strand at 2.431 kb on - strand at 2.431 kb on - strand at 2.473 kb on - strand at 2.473 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 736 + -0.3 766 + +0.9 766 + -1.0 898 - -0.5 1,025 + H281DRAFT_04607 0.37 +0.1 1,026 - H281DRAFT_04607 0.37 +2.1 1,164 + H281DRAFT_04607 0.74 +0.8 1,699 - H281DRAFT_04609 0.85 +0.4 1,844 + -0.6 2,078 + +0.3 2,078 + +0.3 2,079 - -4.6 2,311 - -3.1 2,316 + -4.2 2,316 + -3.5 2,317 - -1.9 2,317 - -3.1 2,356 + -3.0 2,431 - -4.5 2,431 - -1.9 2,473 - -2.5 2,473 - -2.3
Or see this region's nucleotide sequence