Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04592 and H281DRAFT_04593 are separated by 20 nucleotides H281DRAFT_04593 and H281DRAFT_04594 are separated by 10 nucleotides H281DRAFT_04594 and H281DRAFT_04595 overlap by 4 nucleotides
H281DRAFT_04592: H281DRAFT_04592 - Predicted kinase, aminoglycoside phosphotransferase (APT) family, at 323,940 to 325,046
_04592
H281DRAFT_04593: H281DRAFT_04593 - probable phosphoglycerate mutase, at 325,067 to 325,819
_04593
H281DRAFT_04594: H281DRAFT_04594 - putative oxepin-CoA hydrolase (EC 3.3.2.12) (from data) , at 325,830 to 326,618
_04594
H281DRAFT_04595: H281DRAFT_04595 - 3-hydroxyacyl-CoA dehydrogenase, at 326,615 to 328,180
_04595
Position (kb)
325
326
327 Strain fitness (log2 ratio)
-1
0
1
2 at 325.000 kb on + strand at 325.001 kb on - strand at 325.072 kb on + strand at 325.073 kb on - strand at 325.080 kb on + strand at 325.080 kb on + strand at 325.117 kb on + strand at 325.156 kb on - strand, within H281DRAFT_04593 at 325.459 kb on + strand, within H281DRAFT_04593 at 325.482 kb on - strand, within H281DRAFT_04593 at 325.482 kb on - strand, within H281DRAFT_04593 at 325.482 kb on - strand, within H281DRAFT_04593 at 325.719 kb on + strand, within H281DRAFT_04593 at 325.719 kb on + strand, within H281DRAFT_04593 at 325.719 kb on + strand, within H281DRAFT_04593 at 325.743 kb on - strand, within H281DRAFT_04593 at 325.762 kb on + strand at 325.766 kb on + strand at 325.773 kb on + strand at 325.773 kb on + strand at 325.773 kb on + strand at 325.774 kb on - strand at 325.835 kb on + strand at 325.837 kb on + strand at 325.913 kb on + strand, within H281DRAFT_04594 at 326.001 kb on + strand, within H281DRAFT_04594 at 326.515 kb on + strand, within H281DRAFT_04594 at 326.516 kb on - strand, within H281DRAFT_04594 at 326.516 kb on - strand, within H281DRAFT_04594 at 326.565 kb on + strand at 326.746 kb on + strand at 326.902 kb on + strand, within H281DRAFT_04595 at 327.032 kb on - strand, within H281DRAFT_04595 at 327.225 kb on + strand, within H281DRAFT_04595 at 327.226 kb on - strand, within H281DRAFT_04595 at 327.319 kb on - strand, within H281DRAFT_04595 at 327.324 kb on + strand, within H281DRAFT_04595 at 327.382 kb on + strand, within H281DRAFT_04595 at 327.383 kb on - strand, within H281DRAFT_04595 at 327.395 kb on - strand, within H281DRAFT_04595 at 327.411 kb on + strand, within H281DRAFT_04595 at 327.423 kb on + strand, within H281DRAFT_04595 at 327.424 kb on - strand, within H281DRAFT_04595 at 327.449 kb on + strand, within H281DRAFT_04595
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 325,000 + +0.0 325,001 - +0.0 325,072 + +0.7 325,073 - -0.4 325,080 + -0.8 325,080 + -0.2 325,117 + -0.0 325,156 - H281DRAFT_04593 0.12 +0.5 325,459 + H281DRAFT_04593 0.52 +0.3 325,482 - H281DRAFT_04593 0.55 +0.1 325,482 - H281DRAFT_04593 0.55 +0.1 325,482 - H281DRAFT_04593 0.55 +0.2 325,719 + H281DRAFT_04593 0.87 +0.1 325,719 + H281DRAFT_04593 0.87 -0.2 325,719 + H281DRAFT_04593 0.87 +0.0 325,743 - H281DRAFT_04593 0.90 +0.9 325,762 + +1.3 325,766 + +0.2 325,773 + +0.4 325,773 + +0.0 325,773 + +0.7 325,774 - -0.6 325,835 + +1.1 325,837 + +0.2 325,913 + H281DRAFT_04594 0.11 +2.4 326,001 + H281DRAFT_04594 0.22 +0.7 326,515 + H281DRAFT_04594 0.87 +0.9 326,516 - H281DRAFT_04594 0.87 -0.1 326,516 - H281DRAFT_04594 0.87 +0.1 326,565 + +1.5 326,746 + -0.3 326,902 + H281DRAFT_04595 0.18 +0.6 327,032 - H281DRAFT_04595 0.27 -0.0 327,225 + H281DRAFT_04595 0.39 +0.9 327,226 - H281DRAFT_04595 0.39 +0.0 327,319 - H281DRAFT_04595 0.45 +0.0 327,324 + H281DRAFT_04595 0.45 +0.6 327,382 + H281DRAFT_04595 0.49 +0.7 327,383 - H281DRAFT_04595 0.49 +0.5 327,395 - H281DRAFT_04595 0.50 +0.1 327,411 + H281DRAFT_04595 0.51 +0.2 327,423 + H281DRAFT_04595 0.52 -0.2 327,424 - H281DRAFT_04595 0.52 +0.2 327,449 + H281DRAFT_04595 0.53 +1.1
Or see this region's nucleotide sequence