Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04533 and H281DRAFT_04535 are separated by 120 nucleotides H281DRAFT_04535 and H281DRAFT_04536 are separated by 203 nucleotides H281DRAFT_04536 and H281DRAFT_04537 overlap by 4 nucleotides
H281DRAFT_04533: H281DRAFT_04533 - two-component system, OmpR family, KDP operon response regulator KdpE, at 266,591 to 267,289
_04533
H281DRAFT_04535: H281DRAFT_04535 - quaternary ammonium compound-resistance protein SugE, at 267,410 to 267,730
_04535
H281DRAFT_04536: H281DRAFT_04536 - protein of unknown function (DUF4126), at 267,934 to 268,545
_04536
H281DRAFT_04537: H281DRAFT_04537 - putative ABC transport system permease protein, at 268,542 to 271,187
_04537
Position (kb) 267
268
269 Strain fitness (log2 ratio) -1
0
1 at 267.171 kb on - strand, within H281DRAFT_04533 at 267.171 kb on - strand, within H281DRAFT_04533 at 267.171 kb on - strand, within H281DRAFT_04533 at 267.176 kb on + strand, within H281DRAFT_04533 at 267.188 kb on + strand at 267.188 kb on + strand, within H281DRAFT_04533 at 267.188 kb on + strand, within H281DRAFT_04533 at 267.189 kb on - strand, within H281DRAFT_04533 at 267.189 kb on - strand, within H281DRAFT_04533 at 267.190 kb on + strand, within H281DRAFT_04533 at 267.334 kb on - strand at 267.335 kb on + strand at 267.335 kb on + strand at 267.336 kb on - strand at 267.340 kb on - strand at 267.427 kb on - strand at 267.556 kb on + strand, within H281DRAFT_04535 at 267.780 kb on - strand at 267.788 kb on + strand at 268.051 kb on - strand, within H281DRAFT_04536 at 268.170 kb on + strand, within H281DRAFT_04536 at 268.296 kb on + strand, within H281DRAFT_04536 at 268.311 kb on + strand, within H281DRAFT_04536 at 268.338 kb on + strand, within H281DRAFT_04536 at 268.345 kb on - strand, within H281DRAFT_04536 at 268.510 kb on - strand at 269.137 kb on + strand, within H281DRAFT_04537 at 269.137 kb on + strand, within H281DRAFT_04537 at 269.301 kb on + strand, within H281DRAFT_04537 at 269.301 kb on + strand, within H281DRAFT_04537 at 269.302 kb on - strand, within H281DRAFT_04537 at 269.526 kb on + strand, within H281DRAFT_04537 at 269.526 kb on + strand, within H281DRAFT_04537 at 269.526 kb on + strand, within H281DRAFT_04537 at 269.526 kb on + strand, within H281DRAFT_04537 at 269.527 kb on - strand, within H281DRAFT_04537 at 269.527 kb on - strand, within H281DRAFT_04537
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 267,171 - H281DRAFT_04533 0.83 -1.1 267,171 - H281DRAFT_04533 0.83 -1.0 267,171 - H281DRAFT_04533 0.83 -0.8 267,176 + H281DRAFT_04533 0.84 +0.7 267,188 + +0.5 267,188 + H281DRAFT_04533 0.85 +0.2 267,188 + H281DRAFT_04533 0.85 -0.1 267,189 - H281DRAFT_04533 0.86 +0.8 267,189 - H281DRAFT_04533 0.86 +0.1 267,190 + H281DRAFT_04533 0.86 -0.5 267,334 - -1.4 267,335 + +0.3 267,335 + +1.5 267,336 - -0.5 267,340 - +0.0 267,427 - +0.2 267,556 + H281DRAFT_04535 0.45 +0.2 267,780 - +0.7 267,788 + -0.2 268,051 - H281DRAFT_04536 0.19 +1.2 268,170 + H281DRAFT_04536 0.39 +0.9 268,296 + H281DRAFT_04536 0.59 +1.3 268,311 + H281DRAFT_04536 0.62 +0.0 268,338 + H281DRAFT_04536 0.66 -0.3 268,345 - H281DRAFT_04536 0.67 +1.3 268,510 - +1.4 269,137 + H281DRAFT_04537 0.22 +0.6 269,137 + H281DRAFT_04537 0.22 +0.0 269,301 + H281DRAFT_04537 0.29 +0.8 269,301 + H281DRAFT_04537 0.29 +0.1 269,302 - H281DRAFT_04537 0.29 +0.4 269,526 + H281DRAFT_04537 0.37 -0.1 269,526 + H281DRAFT_04537 0.37 -0.4 269,526 + H281DRAFT_04537 0.37 +0.4 269,526 + H281DRAFT_04537 0.37 -0.9 269,527 - H281DRAFT_04537 0.37 +0.5 269,527 - H281DRAFT_04537 0.37 -1.1
Or see this region's nucleotide sequence