Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04483 and H281DRAFT_04484 are separated by 37 nucleotides H281DRAFT_04484 and H281DRAFT_04485 are separated by 240 nucleotides H281DRAFT_04485 and H281DRAFT_04486 overlap by 4 nucleotides
H281DRAFT_04483: H281DRAFT_04483 - tRNA-processing RNAse BN, at 213,825 to 215,135
_04483
H281DRAFT_04484: H281DRAFT_04484 - hypothetical protein, at 215,173 to 215,493
_04484
H281DRAFT_04485: H281DRAFT_04485 - Pimeloyl-ACP methyl ester carboxylesterase, at 215,734 to 216,567
_04485
H281DRAFT_04486: H281DRAFT_04486 - O-acetylhomoserine sulfhydrylase, at 216,564 to 217,961
_04486
Position (kb) 215
216
217 Strain fitness (log2 ratio) -1
0
1
2
3 at 214.755 kb on + strand, within H281DRAFT_04483 at 214.923 kb on + strand, within H281DRAFT_04483 at 215.133 kb on + strand at 215.134 kb on - strand at 215.175 kb on - strand at 215.191 kb on + strand at 215.232 kb on + strand, within H281DRAFT_04484 at 215.232 kb on + strand, within H281DRAFT_04484 at 215.235 kb on - strand, within H281DRAFT_04484 at 215.435 kb on + strand, within H281DRAFT_04484 at 215.435 kb on + strand, within H281DRAFT_04484 at 215.435 kb on + strand, within H281DRAFT_04484 at 215.436 kb on - strand, within H281DRAFT_04484 at 215.444 kb on + strand, within H281DRAFT_04484 at 215.484 kb on + strand at 215.838 kb on + strand, within H281DRAFT_04485 at 215.839 kb on - strand, within H281DRAFT_04485 at 215.839 kb on - strand, within H281DRAFT_04485 at 215.839 kb on - strand, within H281DRAFT_04485 at 215.839 kb on - strand, within H281DRAFT_04485 at 215.976 kb on - strand, within H281DRAFT_04485 at 215.979 kb on + strand, within H281DRAFT_04485 at 215.979 kb on + strand, within H281DRAFT_04485 at 215.980 kb on - strand, within H281DRAFT_04485 at 215.980 kb on - strand, within H281DRAFT_04485 at 215.980 kb on - strand, within H281DRAFT_04485 at 216.434 kb on + strand, within H281DRAFT_04485 at 216.434 kb on + strand, within H281DRAFT_04485 at 216.454 kb on + strand, within H281DRAFT_04485 at 216.455 kb on - strand, within H281DRAFT_04485 at 216.459 kb on + strand, within H281DRAFT_04485 at 216.459 kb on + strand, within H281DRAFT_04485 at 216.530 kb on + strand at 216.530 kb on + strand at 216.531 kb on - strand at 216.536 kb on + strand at 216.536 kb on + strand at 216.922 kb on - strand, within H281DRAFT_04486 at 217.203 kb on + strand, within H281DRAFT_04486 at 217.203 kb on + strand, within H281DRAFT_04486 at 217.222 kb on + strand, within H281DRAFT_04486 at 217.281 kb on + strand, within H281DRAFT_04486 at 217.282 kb on - strand, within H281DRAFT_04486 at 217.340 kb on - strand, within H281DRAFT_04486 at 217.340 kb on - strand, within H281DRAFT_04486 at 217.378 kb on + strand, within H281DRAFT_04486 at 217.379 kb on - strand, within H281DRAFT_04486
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 214,755 + H281DRAFT_04483 0.71 -0.7 214,923 + H281DRAFT_04483 0.84 -0.4 215,133 + +0.4 215,134 - -0.3 215,175 - -0.3 215,191 + -0.7 215,232 + H281DRAFT_04484 0.18 +0.9 215,232 + H281DRAFT_04484 0.18 -0.4 215,235 - H281DRAFT_04484 0.19 +1.5 215,435 + H281DRAFT_04484 0.82 +0.2 215,435 + H281DRAFT_04484 0.82 -0.1 215,435 + H281DRAFT_04484 0.82 +0.2 215,436 - H281DRAFT_04484 0.82 +3.2 215,444 + H281DRAFT_04484 0.84 +0.1 215,484 + -0.1 215,838 + H281DRAFT_04485 0.12 -0.1 215,839 - H281DRAFT_04485 0.13 +0.5 215,839 - H281DRAFT_04485 0.13 -0.2 215,839 - H281DRAFT_04485 0.13 +0.3 215,839 - H281DRAFT_04485 0.13 -1.2 215,976 - H281DRAFT_04485 0.29 +0.9 215,979 + H281DRAFT_04485 0.29 -0.3 215,979 + H281DRAFT_04485 0.29 -0.3 215,980 - H281DRAFT_04485 0.29 -0.1 215,980 - H281DRAFT_04485 0.29 +0.0 215,980 - H281DRAFT_04485 0.29 +0.1 216,434 + H281DRAFT_04485 0.84 +0.3 216,434 + H281DRAFT_04485 0.84 -0.5 216,454 + H281DRAFT_04485 0.86 -0.3 216,455 - H281DRAFT_04485 0.86 -1.2 216,459 + H281DRAFT_04485 0.87 +1.2 216,459 + H281DRAFT_04485 0.87 -0.0 216,530 + +0.4 216,530 + +0.3 216,531 - +2.4 216,536 + +0.0 216,536 + +0.5 216,922 - H281DRAFT_04486 0.26 -0.3 217,203 + H281DRAFT_04486 0.46 +0.5 217,203 + H281DRAFT_04486 0.46 +1.0 217,222 + H281DRAFT_04486 0.47 -0.4 217,281 + H281DRAFT_04486 0.51 +0.1 217,282 - H281DRAFT_04486 0.51 +0.3 217,340 - H281DRAFT_04486 0.56 +0.5 217,340 - H281DRAFT_04486 0.56 +1.2 217,378 + H281DRAFT_04486 0.58 -1.0 217,379 - H281DRAFT_04486 0.58 +0.8
Or see this region's nucleotide sequence