Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04477 and H281DRAFT_04478 are separated by 224 nucleotides H281DRAFT_04478 and H281DRAFT_04479 are separated by 80 nucleotides H281DRAFT_04479 and H281DRAFT_04480 are separated by 67 nucleotides
H281DRAFT_04477: H281DRAFT_04477 - transcriptional regulator, LysR family, at 208,865 to 209,803
_04477
H281DRAFT_04478: H281DRAFT_04478 - hypothetical protein, at 210,028 to 210,186
_04478
H281DRAFT_04479: H281DRAFT_04479 - DNA repair exonuclease, at 210,267 to 211,085
_04479
H281DRAFT_04480: H281DRAFT_04480 - FAD/FMN-containing dehydrogenase, at 211,153 to 212,577
_04480
Position (kb) 210
211 Strain fitness (log2 ratio) -1
0
1 at 209.058 kb on - strand, within H281DRAFT_04477 at 209.058 kb on - strand, within H281DRAFT_04477 at 209.088 kb on - strand, within H281DRAFT_04477 at 209.088 kb on - strand, within H281DRAFT_04477 at 209.088 kb on - strand, within H281DRAFT_04477 at 209.088 kb on - strand, within H281DRAFT_04477 at 209.180 kb on + strand, within H281DRAFT_04477 at 209.180 kb on + strand, within H281DRAFT_04477 at 209.181 kb on - strand, within H281DRAFT_04477 at 209.181 kb on - strand, within H281DRAFT_04477 at 209.359 kb on + strand, within H281DRAFT_04477 at 209.359 kb on + strand, within H281DRAFT_04477 at 209.359 kb on + strand, within H281DRAFT_04477 at 209.360 kb on - strand, within H281DRAFT_04477 at 209.360 kb on - strand, within H281DRAFT_04477 at 209.378 kb on + strand, within H281DRAFT_04477 at 209.379 kb on - strand, within H281DRAFT_04477 at 209.652 kb on - strand, within H281DRAFT_04477 at 209.676 kb on - strand, within H281DRAFT_04477 at 209.684 kb on + strand, within H281DRAFT_04477 at 209.699 kb on + strand, within H281DRAFT_04477 at 209.886 kb on - strand at 209.886 kb on - strand at 209.886 kb on - strand at 209.914 kb on + strand at 209.977 kb on - strand at 209.977 kb on - strand at 210.268 kb on + strand at 210.268 kb on + strand at 210.268 kb on + strand at 210.269 kb on - strand at 210.270 kb on + strand at 210.270 kb on + strand at 210.270 kb on + strand at 210.270 kb on + strand at 210.271 kb on - strand at 210.411 kb on + strand, within H281DRAFT_04479 at 210.412 kb on - strand, within H281DRAFT_04479 at 210.481 kb on + strand, within H281DRAFT_04479 at 210.482 kb on - strand, within H281DRAFT_04479 at 210.640 kb on + strand, within H281DRAFT_04479 at 210.640 kb on + strand, within H281DRAFT_04479 at 210.641 kb on - strand, within H281DRAFT_04479 at 210.901 kb on + strand, within H281DRAFT_04479 at 210.902 kb on - strand, within H281DRAFT_04479 at 210.902 kb on - strand, within H281DRAFT_04479 at 210.923 kb on - strand, within H281DRAFT_04479 at 211.154 kb on + strand at 211.155 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 209,058 - H281DRAFT_04477 0.21 +0.2 209,058 - H281DRAFT_04477 0.21 +0.8 209,088 - H281DRAFT_04477 0.24 -0.1 209,088 - H281DRAFT_04477 0.24 -0.2 209,088 - H281DRAFT_04477 0.24 +0.1 209,088 - H281DRAFT_04477 0.24 +1.0 209,180 + H281DRAFT_04477 0.34 -0.0 209,180 + H281DRAFT_04477 0.34 -0.1 209,181 - H281DRAFT_04477 0.34 +0.6 209,181 - H281DRAFT_04477 0.34 +0.2 209,359 + H281DRAFT_04477 0.53 +0.3 209,359 + H281DRAFT_04477 0.53 +0.4 209,359 + H281DRAFT_04477 0.53 +1.3 209,360 - H281DRAFT_04477 0.53 +0.5 209,360 - H281DRAFT_04477 0.53 +0.5 209,378 + H281DRAFT_04477 0.55 +0.4 209,379 - H281DRAFT_04477 0.55 -0.5 209,652 - H281DRAFT_04477 0.84 +0.1 209,676 - H281DRAFT_04477 0.86 -0.1 209,684 + H281DRAFT_04477 0.87 +1.5 209,699 + H281DRAFT_04477 0.89 -0.2 209,886 - -0.1 209,886 - -0.6 209,886 - +0.6 209,914 + -0.3 209,977 - +0.1 209,977 - -0.9 210,268 + -0.2 210,268 + +0.2 210,268 + -0.1 210,269 - +0.3 210,270 + -1.1 210,270 + -0.3 210,270 + -0.4 210,270 + -0.8 210,271 - +0.3 210,411 + H281DRAFT_04479 0.18 +1.6 210,412 - H281DRAFT_04479 0.18 +0.5 210,481 + H281DRAFT_04479 0.26 +0.7 210,482 - H281DRAFT_04479 0.26 +0.5 210,640 + H281DRAFT_04479 0.46 -0.3 210,640 + H281DRAFT_04479 0.46 -0.5 210,641 - H281DRAFT_04479 0.46 +1.1 210,901 + H281DRAFT_04479 0.77 +0.2 210,902 - H281DRAFT_04479 0.78 -0.4 210,902 - H281DRAFT_04479 0.78 +1.4 210,923 - H281DRAFT_04479 0.80 -0.1 211,154 + +0.4 211,155 - +1.4
Or see this region's nucleotide sequence