Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04476 and H281DRAFT_04477 are separated by 155 nucleotides H281DRAFT_04477 and H281DRAFT_04478 are separated by 224 nucleotides H281DRAFT_04478 and H281DRAFT_04479 are separated by 80 nucleotides
H281DRAFT_04476: H281DRAFT_04476 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 207,045 to 208,709
_04476
H281DRAFT_04477: H281DRAFT_04477 - transcriptional regulator, LysR family, at 208,865 to 209,803
_04477
H281DRAFT_04478: H281DRAFT_04478 - hypothetical protein, at 210,028 to 210,186
_04478
H281DRAFT_04479: H281DRAFT_04479 - DNA repair exonuclease, at 210,267 to 211,085
_04479
Position (kb) 208
209
210 Strain fitness (log2 ratio) -1
0
1 at 208.021 kb on - strand, within H281DRAFT_04476 at 208.021 kb on - strand, within H281DRAFT_04476 at 208.123 kb on + strand, within H281DRAFT_04476 at 208.124 kb on - strand, within H281DRAFT_04476 at 208.144 kb on + strand, within H281DRAFT_04476 at 208.267 kb on + strand, within H281DRAFT_04476 at 208.267 kb on + strand, within H281DRAFT_04476 at 208.268 kb on - strand, within H281DRAFT_04476 at 208.331 kb on - strand, within H281DRAFT_04476 at 208.331 kb on - strand, within H281DRAFT_04476 at 208.331 kb on - strand, within H281DRAFT_04476 at 208.331 kb on - strand, within H281DRAFT_04476 at 208.333 kb on + strand, within H281DRAFT_04476 at 208.333 kb on + strand, within H281DRAFT_04476 at 208.334 kb on - strand, within H281DRAFT_04476 at 208.602 kb on - strand at 208.654 kb on - strand at 208.665 kb on - strand at 208.731 kb on + strand at 208.731 kb on + strand at 208.731 kb on + strand at 208.732 kb on - strand at 208.732 kb on - strand at 208.732 kb on - strand at 208.864 kb on + strand at 208.864 kb on + strand at 208.871 kb on - strand at 208.890 kb on + strand at 208.890 kb on + strand at 208.890 kb on + strand at 208.891 kb on - strand at 208.945 kb on + strand at 208.946 kb on - strand at 208.946 kb on - strand at 208.958 kb on + strand at 208.958 kb on + strand at 209.058 kb on - strand, within H281DRAFT_04477 at 209.058 kb on - strand, within H281DRAFT_04477 at 209.088 kb on - strand, within H281DRAFT_04477 at 209.088 kb on - strand, within H281DRAFT_04477 at 209.088 kb on - strand, within H281DRAFT_04477 at 209.088 kb on - strand, within H281DRAFT_04477 at 209.180 kb on + strand, within H281DRAFT_04477 at 209.180 kb on + strand, within H281DRAFT_04477 at 209.181 kb on - strand, within H281DRAFT_04477 at 209.181 kb on - strand, within H281DRAFT_04477 at 209.359 kb on + strand, within H281DRAFT_04477 at 209.359 kb on + strand, within H281DRAFT_04477 at 209.359 kb on + strand, within H281DRAFT_04477 at 209.360 kb on - strand, within H281DRAFT_04477 at 209.360 kb on - strand, within H281DRAFT_04477 at 209.378 kb on + strand, within H281DRAFT_04477 at 209.379 kb on - strand, within H281DRAFT_04477 at 209.652 kb on - strand, within H281DRAFT_04477 at 209.676 kb on - strand, within H281DRAFT_04477 at 209.684 kb on + strand, within H281DRAFT_04477 at 209.699 kb on + strand, within H281DRAFT_04477 at 209.886 kb on - strand at 209.886 kb on - strand at 209.886 kb on - strand at 209.914 kb on + strand at 209.977 kb on - strand at 209.977 kb on - strand at 210.268 kb on + strand at 210.268 kb on + strand at 210.268 kb on + strand at 210.269 kb on - strand at 210.270 kb on + strand at 210.270 kb on + strand at 210.270 kb on + strand at 210.270 kb on + strand at 210.271 kb on - strand at 210.411 kb on + strand, within H281DRAFT_04479 at 210.412 kb on - strand, within H281DRAFT_04479 at 210.481 kb on + strand, within H281DRAFT_04479 at 210.482 kb on - strand, within H281DRAFT_04479 at 210.640 kb on + strand, within H281DRAFT_04479 at 210.640 kb on + strand, within H281DRAFT_04479 at 210.641 kb on - strand, within H281DRAFT_04479
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 208,021 - H281DRAFT_04476 0.59 +0.8 208,021 - H281DRAFT_04476 0.59 +0.7 208,123 + H281DRAFT_04476 0.65 -0.2 208,124 - H281DRAFT_04476 0.65 -0.4 208,144 + H281DRAFT_04476 0.66 -1.0 208,267 + H281DRAFT_04476 0.73 +0.4 208,267 + H281DRAFT_04476 0.73 +1.1 208,268 - H281DRAFT_04476 0.73 +0.5 208,331 - H281DRAFT_04476 0.77 -0.7 208,331 - H281DRAFT_04476 0.77 +0.5 208,331 - H281DRAFT_04476 0.77 -0.9 208,331 - H281DRAFT_04476 0.77 +1.1 208,333 + H281DRAFT_04476 0.77 +0.1 208,333 + H281DRAFT_04476 0.77 +0.2 208,334 - H281DRAFT_04476 0.77 +1.2 208,602 - +0.5 208,654 - +0.1 208,665 - +0.0 208,731 + -0.5 208,731 + -0.6 208,731 + +0.2 208,732 - +0.1 208,732 - +0.4 208,732 - -0.4 208,864 + +0.2 208,864 + -0.1 208,871 - -0.4 208,890 + +0.5 208,890 + +0.6 208,890 + -0.1 208,891 - +0.1 208,945 + -0.2 208,946 - -0.0 208,946 - -0.0 208,958 + +0.7 208,958 + -0.1 209,058 - H281DRAFT_04477 0.21 +0.2 209,058 - H281DRAFT_04477 0.21 +0.8 209,088 - H281DRAFT_04477 0.24 -0.1 209,088 - H281DRAFT_04477 0.24 -0.2 209,088 - H281DRAFT_04477 0.24 +0.1 209,088 - H281DRAFT_04477 0.24 +1.0 209,180 + H281DRAFT_04477 0.34 -0.0 209,180 + H281DRAFT_04477 0.34 -0.1 209,181 - H281DRAFT_04477 0.34 +0.6 209,181 - H281DRAFT_04477 0.34 +0.2 209,359 + H281DRAFT_04477 0.53 +0.3 209,359 + H281DRAFT_04477 0.53 +0.4 209,359 + H281DRAFT_04477 0.53 +1.3 209,360 - H281DRAFT_04477 0.53 +0.5 209,360 - H281DRAFT_04477 0.53 +0.5 209,378 + H281DRAFT_04477 0.55 +0.4 209,379 - H281DRAFT_04477 0.55 -0.5 209,652 - H281DRAFT_04477 0.84 +0.1 209,676 - H281DRAFT_04477 0.86 -0.1 209,684 + H281DRAFT_04477 0.87 +1.5 209,699 + H281DRAFT_04477 0.89 -0.2 209,886 - -0.1 209,886 - -0.6 209,886 - +0.6 209,914 + -0.3 209,977 - +0.1 209,977 - -0.9 210,268 + -0.2 210,268 + +0.2 210,268 + -0.1 210,269 - +0.3 210,270 + -1.1 210,270 + -0.3 210,270 + -0.4 210,270 + -0.8 210,271 - +0.3 210,411 + H281DRAFT_04479 0.18 +1.6 210,412 - H281DRAFT_04479 0.18 +0.5 210,481 + H281DRAFT_04479 0.26 +0.7 210,482 - H281DRAFT_04479 0.26 +0.5 210,640 + H281DRAFT_04479 0.46 -0.3 210,640 + H281DRAFT_04479 0.46 -0.5 210,641 - H281DRAFT_04479 0.46 +1.1
Or see this region's nucleotide sequence