Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04417 and H281DRAFT_04418 are separated by 93 nucleotides H281DRAFT_04418 and H281DRAFT_04419 are separated by 181 nucleotides
H281DRAFT_04417: H281DRAFT_04417 - two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR, at 135,818 to 137,131
_04417
H281DRAFT_04418: H281DRAFT_04418 - polyphosphate kinase, at 137,225 to 139,288
_04418
H281DRAFT_04419: H281DRAFT_04419 - Ppx/GppA phosphatase, at 139,470 to 141,116
_04419
Position (kb) 137
138
139
140 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 136.298 kb on + strand, within H281DRAFT_04417 at 136.371 kb on - strand, within H281DRAFT_04417 at 136.820 kb on + strand, within H281DRAFT_04417 at 136.822 kb on + strand, within H281DRAFT_04417 at 136.823 kb on - strand at 137.096 kb on + strand at 137.178 kb on + strand at 137.181 kb on - strand at 137.182 kb on + strand at 137.182 kb on + strand at 137.183 kb on - strand at 137.183 kb on - strand at 137.183 kb on - strand at 137.186 kb on + strand at 137.187 kb on - strand at 137.457 kb on + strand, within H281DRAFT_04418 at 137.458 kb on - strand, within H281DRAFT_04418 at 137.481 kb on + strand, within H281DRAFT_04418 at 137.487 kb on + strand, within H281DRAFT_04418 at 137.487 kb on + strand, within H281DRAFT_04418 at 137.488 kb on - strand, within H281DRAFT_04418 at 137.488 kb on - strand, within H281DRAFT_04418 at 137.488 kb on - strand, within H281DRAFT_04418 at 137.630 kb on + strand, within H281DRAFT_04418 at 137.631 kb on - strand, within H281DRAFT_04418 at 137.769 kb on - strand, within H281DRAFT_04418 at 137.874 kb on + strand, within H281DRAFT_04418 at 137.898 kb on + strand, within H281DRAFT_04418 at 137.899 kb on - strand, within H281DRAFT_04418 at 137.922 kb on + strand, within H281DRAFT_04418 at 138.009 kb on + strand, within H281DRAFT_04418 at 138.249 kb on + strand, within H281DRAFT_04418 at 138.420 kb on + strand, within H281DRAFT_04418 at 138.903 kb on + strand, within H281DRAFT_04418 at 139.009 kb on - strand, within H281DRAFT_04418 at 139.009 kb on - strand, within H281DRAFT_04418 at 139.313 kb on + strand at 139.349 kb on - strand at 139.363 kb on - strand at 139.381 kb on + strand at 139.388 kb on + strand at 139.416 kb on - strand at 139.416 kb on - strand at 139.416 kb on - strand at 139.487 kb on + strand at 139.488 kb on - strand at 139.488 kb on - strand at 139.488 kb on - strand at 139.488 kb on - strand at 139.613 kb on + strand at 139.613 kb on + strand at 140.217 kb on + strand, within H281DRAFT_04419 at 140.218 kb on - strand, within H281DRAFT_04419
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 136,298 + H281DRAFT_04417 0.37 +0.5 136,371 - H281DRAFT_04417 0.42 +0.6 136,820 + H281DRAFT_04417 0.76 +1.1 136,822 + H281DRAFT_04417 0.76 -0.7 136,823 - -0.7 137,096 + +0.3 137,178 + -0.6 137,181 - -0.4 137,182 + -0.1 137,182 + -0.5 137,183 - +0.2 137,183 - +0.1 137,183 - -0.4 137,186 + +0.1 137,187 - -0.2 137,457 + H281DRAFT_04418 0.11 -0.1 137,458 - H281DRAFT_04418 0.11 -0.7 137,481 + H281DRAFT_04418 0.12 -1.9 137,487 + H281DRAFT_04418 0.13 -0.6 137,487 + H281DRAFT_04418 0.13 -1.3 137,488 - H281DRAFT_04418 0.13 -1.0 137,488 - H281DRAFT_04418 0.13 -0.4 137,488 - H281DRAFT_04418 0.13 -0.1 137,630 + H281DRAFT_04418 0.20 -1.0 137,631 - H281DRAFT_04418 0.20 -0.7 137,769 - H281DRAFT_04418 0.26 -1.9 137,874 + H281DRAFT_04418 0.31 -0.7 137,898 + H281DRAFT_04418 0.33 -0.7 137,899 - H281DRAFT_04418 0.33 -1.3 137,922 + H281DRAFT_04418 0.34 -0.2 138,009 + H281DRAFT_04418 0.38 -0.1 138,249 + H281DRAFT_04418 0.50 +0.6 138,420 + H281DRAFT_04418 0.58 -0.9 138,903 + H281DRAFT_04418 0.81 -0.3 139,009 - H281DRAFT_04418 0.86 -0.2 139,009 - H281DRAFT_04418 0.86 -0.3 139,313 + -0.3 139,349 - -0.2 139,363 - +0.6 139,381 + +1.1 139,388 + -1.3 139,416 - +0.2 139,416 - -0.1 139,416 - +0.1 139,487 + -0.4 139,488 - -0.3 139,488 - +0.7 139,488 - +0.1 139,488 - +4.2 139,613 + +0.2 139,613 + +0.2 140,217 + H281DRAFT_04419 0.45 +0.0 140,218 - H281DRAFT_04419 0.45 -1.0
Or see this region's nucleotide sequence