Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04293 and H281DRAFT_04294 are separated by 38 nucleotides H281DRAFT_04294 and H281DRAFT_04295 are separated by 146 nucleotides H281DRAFT_04295 and H281DRAFT_04296 are separated by 91 nucleotides H281DRAFT_04296 and H281DRAFT_04297 are separated by 114 nucleotides
H281DRAFT_04293: H281DRAFT_04293 - 16S rRNA processing protein RimM, at 8,888 to 9,646
_04293
H281DRAFT_04294: H281DRAFT_04294 - tRNA (Guanine37-N(1)-) methyltransferase, at 9,685 to 10,452
_04294
H281DRAFT_04295: H281DRAFT_04295 - LSU ribosomal protein L19P, at 10,599 to 10,985
_04295
H281DRAFT_04296: H281DRAFT_04296 - 8-oxo-dGTP pyrophosphatase MutT, NUDIX family, at 11,077 to 11,793
_04296
H281DRAFT_04297: H281DRAFT_04297 - adenosylcobinamide-phosphate synthase, at 11,908 to 12,846
_04297
Position (kb)
10
11 Strain fitness (log2 ratio)
-1
0
1 at 9.641 kb on + strand at 9.647 kb on + strand at 9.647 kb on + strand at 9.647 kb on + strand at 10.984 kb on - strand at 11.241 kb on + strand, within H281DRAFT_04296 at 11.337 kb on + strand, within H281DRAFT_04296 at 11.337 kb on + strand, within H281DRAFT_04296 at 11.482 kb on + strand, within H281DRAFT_04296 at 11.517 kb on - strand, within H281DRAFT_04296 at 11.576 kb on + strand, within H281DRAFT_04296 at 11.577 kb on - strand, within H281DRAFT_04296 at 11.732 kb on - strand at 11.863 kb on - strand at 11.869 kb on - strand at 11.979 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 9,641 + -0.9 9,647 + -0.3 9,647 + -0.4 9,647 + +0.8 10,984 - -0.1 11,241 + H281DRAFT_04296 0.23 -0.1 11,337 + H281DRAFT_04296 0.36 -0.5 11,337 + H281DRAFT_04296 0.36 +0.4 11,482 + H281DRAFT_04296 0.56 +0.3 11,517 - H281DRAFT_04296 0.61 -1.7 11,576 + H281DRAFT_04296 0.70 +0.8 11,577 - H281DRAFT_04296 0.70 +1.4 11,732 - -1.1 11,863 - -1.6 11,869 - -1.1 11,979 - -0.1
Or see this region's nucleotide sequence