Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04199 and H281DRAFT_04200 are separated by 53 nucleotides H281DRAFT_04200 and H281DRAFT_04201 are separated by 52 nucleotides H281DRAFT_04201 and H281DRAFT_04202 are separated by 99 nucleotides H281DRAFT_04202 and H281DRAFT_04203 are separated by 98 nucleotides
H281DRAFT_04199: H281DRAFT_04199 - Putative Zn-dependent protease, contains TPR repeats, at 317,782 to 319,650
_04199
H281DRAFT_04200: H281DRAFT_04200 - cyclic pyranopterin monophosphate synthase subunit MoaC, at 319,704 to 320,180
_04200
H281DRAFT_04201: H281DRAFT_04201 - O-antigen ligase, at 320,233 to 322,050
_04201
H281DRAFT_04202: H281DRAFT_04202 - type IV pilus assembly protein PilA, at 322,150 to 322,773
_04202
H281DRAFT_04203: H281DRAFT_04203 - integral membrane protein, YjbE family, at 322,872 to 323,582
_04203
Position (kb)
320
321
322
323 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 319.328 kb on + strand, within H281DRAFT_04199 at 319.380 kb on - strand, within H281DRAFT_04199 at 319.588 kb on + strand at 319.588 kb on + strand at 319.589 kb on - strand at 319.593 kb on + strand at 319.614 kb on + strand at 319.614 kb on + strand at 319.615 kb on - strand at 319.615 kb on - strand at 319.674 kb on + strand at 319.674 kb on + strand at 319.675 kb on - strand at 319.675 kb on - strand at 319.679 kb on + strand at 319.680 kb on - strand at 320.216 kb on + strand at 320.217 kb on - strand at 320.345 kb on + strand at 320.346 kb on - strand at 320.351 kb on + strand at 320.351 kb on + strand at 320.636 kb on + strand, within H281DRAFT_04201 at 320.805 kb on - strand, within H281DRAFT_04201 at 321.556 kb on + strand, within H281DRAFT_04201 at 321.936 kb on + strand at 321.936 kb on + strand at 321.936 kb on + strand at 321.937 kb on - strand at 321.937 kb on - strand at 321.937 kb on - strand at 321.937 kb on - strand at 322.052 kb on - strand at 322.054 kb on - strand at 322.152 kb on - strand at 322.152 kb on - strand at 322.152 kb on - strand at 322.191 kb on + strand at 322.192 kb on - strand at 322.192 kb on - strand at 322.351 kb on + strand, within H281DRAFT_04202 at 322.352 kb on - strand, within H281DRAFT_04202 at 322.599 kb on - strand, within H281DRAFT_04202 at 322.689 kb on + strand, within H281DRAFT_04202 at 322.755 kb on - strand at 322.918 kb on + strand at 323.021 kb on + strand, within H281DRAFT_04203 at 323.021 kb on + strand, within H281DRAFT_04203 at 323.021 kb on + strand, within H281DRAFT_04203 at 323.022 kb on - strand, within H281DRAFT_04203 at 323.022 kb on - strand, within H281DRAFT_04203
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 319,328 + H281DRAFT_04199 0.83 -0.5 319,380 - H281DRAFT_04199 0.86 -0.7 319,588 + +0.2 319,588 + +0.5 319,589 - +0.9 319,593 + -0.4 319,614 + -1.3 319,614 + -0.5 319,615 - +0.8 319,615 - -2.0 319,674 + +0.0 319,674 + +3.3 319,675 - -0.5 319,675 - +1.0 319,679 + -0.6 319,680 - -0.6 320,216 + -0.8 320,217 - +0.1 320,345 + +1.3 320,346 - +0.6 320,351 + +0.6 320,351 + -1.8 320,636 + H281DRAFT_04201 0.22 +1.6 320,805 - H281DRAFT_04201 0.31 +0.4 321,556 + H281DRAFT_04201 0.73 +2.3 321,936 + -0.3 321,936 + -0.6 321,936 + -0.0 321,937 - +0.4 321,937 - +0.7 321,937 - +0.6 321,937 - +0.7 322,052 - +0.4 322,054 - +0.5 322,152 - +1.4 322,152 - -0.0 322,152 - +1.0 322,191 + -0.2 322,192 - -1.2 322,192 - +0.9 322,351 + H281DRAFT_04202 0.32 -0.8 322,352 - H281DRAFT_04202 0.32 -0.7 322,599 - H281DRAFT_04202 0.72 -1.7 322,689 + H281DRAFT_04202 0.86 -0.5 322,755 - +0.4 322,918 + -0.2 323,021 + H281DRAFT_04203 0.21 -0.6 323,021 + H281DRAFT_04203 0.21 -1.3 323,021 + H281DRAFT_04203 0.21 +0.1 323,022 - H281DRAFT_04203 0.21 -0.4 323,022 - H281DRAFT_04203 0.21 +0.2
Or see this region's nucleotide sequence