Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04176 and H281DRAFT_04177 are separated by 128 nucleotides H281DRAFT_04177 and H281DRAFT_04178 are separated by 256 nucleotides H281DRAFT_04178 and H281DRAFT_04179 are separated by 141 nucleotides
H281DRAFT_04176: H281DRAFT_04176 - Uncharacterized conserved protein, DUF427 family, at 293,023 to 293,415
_04176
H281DRAFT_04177: H281DRAFT_04177 - hypothetical protein, at 293,544 to 294,041
_04177
H281DRAFT_04178: H281DRAFT_04178 - serine protease Do, at 294,298 to 295,818
_04178
H281DRAFT_04179: H281DRAFT_04179 - two-component system, OmpR family, sensor kinase, at 295,960 to 297,261
_04179
Position (kb) 294
295
296 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 293.355 kb on + strand, within H281DRAFT_04176 at 293.355 kb on + strand, within H281DRAFT_04176 at 293.356 kb on - strand, within H281DRAFT_04176 at 293.448 kb on + strand at 293.626 kb on + strand, within H281DRAFT_04177 at 293.645 kb on - strand, within H281DRAFT_04177 at 293.674 kb on + strand, within H281DRAFT_04177 at 293.675 kb on - strand, within H281DRAFT_04177 at 293.675 kb on - strand, within H281DRAFT_04177 at 293.711 kb on + strand, within H281DRAFT_04177 at 293.749 kb on + strand, within H281DRAFT_04177 at 293.749 kb on + strand, within H281DRAFT_04177 at 293.749 kb on + strand, within H281DRAFT_04177 at 293.750 kb on - strand, within H281DRAFT_04177 at 293.768 kb on + strand, within H281DRAFT_04177 at 294.054 kb on + strand at 294.361 kb on - strand at 294.361 kb on - strand at 294.998 kb on + strand, within H281DRAFT_04178 at 295.100 kb on + strand, within H281DRAFT_04178 at 295.156 kb on - strand, within H281DRAFT_04178 at 295.381 kb on - strand, within H281DRAFT_04178 at 295.382 kb on + strand, within H281DRAFT_04178 at 295.383 kb on - strand, within H281DRAFT_04178 at 295.383 kb on - strand, within H281DRAFT_04178 at 295.383 kb on - strand, within H281DRAFT_04178 at 295.401 kb on + strand, within H281DRAFT_04178 at 295.401 kb on + strand, within H281DRAFT_04178 at 295.401 kb on + strand, within H281DRAFT_04178 at 295.493 kb on + strand, within H281DRAFT_04178 at 295.493 kb on + strand, within H281DRAFT_04178 at 295.494 kb on - strand, within H281DRAFT_04178 at 295.494 kb on - strand, within H281DRAFT_04178 at 295.502 kb on + strand, within H281DRAFT_04178 at 295.503 kb on - strand, within H281DRAFT_04178 at 295.823 kb on + strand at 295.888 kb on + strand at 295.888 kb on + strand at 295.888 kb on + strand at 295.889 kb on - strand at 295.974 kb on + strand at 295.975 kb on - strand at 296.017 kb on - strand at 296.083 kb on - strand at 296.240 kb on + strand, within H281DRAFT_04179 at 296.240 kb on + strand, within H281DRAFT_04179 at 296.241 kb on - strand, within H281DRAFT_04179 at 296.241 kb on - strand, within H281DRAFT_04179 at 296.367 kb on - strand, within H281DRAFT_04179
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 293,355 + H281DRAFT_04176 0.84 +0.5 293,355 + H281DRAFT_04176 0.84 +0.3 293,356 - H281DRAFT_04176 0.85 +0.0 293,448 + +0.9 293,626 + H281DRAFT_04177 0.16 -1.0 293,645 - H281DRAFT_04177 0.20 +0.5 293,674 + H281DRAFT_04177 0.26 -0.4 293,675 - H281DRAFT_04177 0.26 -0.1 293,675 - H281DRAFT_04177 0.26 -0.4 293,711 + H281DRAFT_04177 0.34 -0.0 293,749 + H281DRAFT_04177 0.41 -0.3 293,749 + H281DRAFT_04177 0.41 -1.2 293,749 + H281DRAFT_04177 0.41 -1.2 293,750 - H281DRAFT_04177 0.41 -1.8 293,768 + H281DRAFT_04177 0.45 +0.2 294,054 + +0.6 294,361 - -0.6 294,361 - -0.3 294,998 + H281DRAFT_04178 0.46 +3.3 295,100 + H281DRAFT_04178 0.53 -2.0 295,156 - H281DRAFT_04178 0.56 -1.3 295,381 - H281DRAFT_04178 0.71 -0.9 295,382 + H281DRAFT_04178 0.71 -0.5 295,383 - H281DRAFT_04178 0.71 -0.6 295,383 - H281DRAFT_04178 0.71 -1.6 295,383 - H281DRAFT_04178 0.71 +0.6 295,401 + H281DRAFT_04178 0.73 -1.2 295,401 + H281DRAFT_04178 0.73 +0.3 295,401 + H281DRAFT_04178 0.73 -0.2 295,493 + H281DRAFT_04178 0.79 -0.8 295,493 + H281DRAFT_04178 0.79 -0.2 295,494 - H281DRAFT_04178 0.79 -0.0 295,494 - H281DRAFT_04178 0.79 -0.1 295,502 + H281DRAFT_04178 0.79 +0.3 295,503 - H281DRAFT_04178 0.79 -0.8 295,823 + -0.7 295,888 + -0.3 295,888 + +0.1 295,888 + +0.0 295,889 - -0.3 295,974 + +1.3 295,975 - -2.2 296,017 - -1.6 296,083 - -1.1 296,240 + H281DRAFT_04179 0.22 -0.5 296,240 + H281DRAFT_04179 0.22 -0.4 296,241 - H281DRAFT_04179 0.22 -2.2 296,241 - H281DRAFT_04179 0.22 -1.1 296,367 - H281DRAFT_04179 0.31 +0.2
Or see this region's nucleotide sequence