Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04173 and H281DRAFT_04174 are separated by 177 nucleotides H281DRAFT_04174 and H281DRAFT_04175 are separated by 237 nucleotides
H281DRAFT_04173: H281DRAFT_04173 - Nicotinamidase-related amidase, at 290,209 to 290,835
_04173
H281DRAFT_04174: H281DRAFT_04174 - Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain, at 291,013 to 292,020
_04174
H281DRAFT_04175: H281DRAFT_04175 - Carbon monoxide dehydrogenase subunit G, at 292,258 to 292,992
_04175
Position (kb) 291
292
293 Strain fitness (log2 ratio) -1
0
1 at 290.020 kb on - strand at 290.020 kb on - strand at 290.020 kb on - strand at 290.263 kb on + strand at 290.278 kb on - strand, within H281DRAFT_04173 at 290.347 kb on + strand, within H281DRAFT_04173 at 290.347 kb on + strand, within H281DRAFT_04173 at 290.478 kb on + strand, within H281DRAFT_04173 at 290.489 kb on + strand, within H281DRAFT_04173 at 290.489 kb on + strand, within H281DRAFT_04173 at 290.490 kb on - strand, within H281DRAFT_04173 at 290.582 kb on + strand, within H281DRAFT_04173 at 290.582 kb on + strand, within H281DRAFT_04173 at 290.582 kb on + strand, within H281DRAFT_04173 at 290.583 kb on - strand, within H281DRAFT_04173 at 290.583 kb on - strand, within H281DRAFT_04173 at 290.583 kb on - strand, within H281DRAFT_04173 at 290.782 kb on + strand at 290.786 kb on + strand at 290.786 kb on + strand at 290.787 kb on - strand at 290.998 kb on + strand at 290.998 kb on + strand at 290.999 kb on - strand at 291.018 kb on + strand at 291.019 kb on - strand at 291.019 kb on - strand at 291.291 kb on + strand, within H281DRAFT_04174 at 291.292 kb on - strand, within H281DRAFT_04174 at 291.380 kb on + strand, within H281DRAFT_04174 at 291.508 kb on + strand, within H281DRAFT_04174 at 291.508 kb on + strand, within H281DRAFT_04174 at 291.509 kb on - strand, within H281DRAFT_04174 at 291.509 kb on - strand, within H281DRAFT_04174 at 291.509 kb on - strand, within H281DRAFT_04174 at 291.509 kb on - strand, within H281DRAFT_04174 at 291.569 kb on + strand, within H281DRAFT_04174 at 291.569 kb on + strand, within H281DRAFT_04174 at 291.570 kb on - strand, within H281DRAFT_04174 at 291.664 kb on + strand, within H281DRAFT_04174 at 291.664 kb on + strand, within H281DRAFT_04174 at 291.664 kb on + strand, within H281DRAFT_04174 at 291.664 kb on + strand, within H281DRAFT_04174 at 291.664 kb on + strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 292.060 kb on - strand at 292.172 kb on + strand at 292.199 kb on + strand at 292.287 kb on - strand at 292.287 kb on - strand at 292.287 kb on - strand at 292.287 kb on - strand at 292.287 kb on - strand at 292.465 kb on + strand, within H281DRAFT_04175 at 292.466 kb on - strand, within H281DRAFT_04175 at 292.466 kb on - strand, within H281DRAFT_04175 at 292.466 kb on - strand, within H281DRAFT_04175 at 292.851 kb on + strand, within H281DRAFT_04175
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 290,020 - -0.2 290,020 - +0.5 290,020 - +0.1 290,263 + -0.0 290,278 - H281DRAFT_04173 0.11 -0.2 290,347 + H281DRAFT_04173 0.22 -0.7 290,347 + H281DRAFT_04173 0.22 +0.9 290,478 + H281DRAFT_04173 0.43 -0.3 290,489 + H281DRAFT_04173 0.45 +0.2 290,489 + H281DRAFT_04173 0.45 +0.1 290,490 - H281DRAFT_04173 0.45 +0.3 290,582 + H281DRAFT_04173 0.59 -0.2 290,582 + H281DRAFT_04173 0.59 +0.7 290,582 + H281DRAFT_04173 0.59 +1.0 290,583 - H281DRAFT_04173 0.60 -0.5 290,583 - H281DRAFT_04173 0.60 -0.3 290,583 - H281DRAFT_04173 0.60 +0.7 290,782 + -0.1 290,786 + +0.8 290,786 + +0.7 290,787 - -0.6 290,998 + -0.3 290,998 + -0.4 290,999 - +0.3 291,018 + +0.3 291,019 - -0.2 291,019 - -1.1 291,291 + H281DRAFT_04174 0.28 +0.3 291,292 - H281DRAFT_04174 0.28 +0.3 291,380 + H281DRAFT_04174 0.36 +0.1 291,508 + H281DRAFT_04174 0.49 +0.3 291,508 + H281DRAFT_04174 0.49 +0.6 291,509 - H281DRAFT_04174 0.49 -0.1 291,509 - H281DRAFT_04174 0.49 +1.2 291,509 - H281DRAFT_04174 0.49 -0.2 291,509 - H281DRAFT_04174 0.49 +1.1 291,569 + H281DRAFT_04174 0.55 +0.4 291,569 + H281DRAFT_04174 0.55 +1.0 291,570 - H281DRAFT_04174 0.55 -0.3 291,664 + H281DRAFT_04174 0.65 +0.3 291,664 + H281DRAFT_04174 0.65 -0.5 291,664 + H281DRAFT_04174 0.65 +0.0 291,664 + H281DRAFT_04174 0.65 -0.1 291,664 + H281DRAFT_04174 0.65 -0.2 291,665 - H281DRAFT_04174 0.65 +0.7 291,665 - H281DRAFT_04174 0.65 +0.5 291,665 - H281DRAFT_04174 0.65 +0.3 291,665 - H281DRAFT_04174 0.65 -0.0 291,665 - H281DRAFT_04174 0.65 -0.1 291,665 - H281DRAFT_04174 0.65 +0.5 291,665 - H281DRAFT_04174 0.65 -0.1 292,060 - +1.0 292,172 + +1.0 292,199 + -0.4 292,287 - -0.1 292,287 - -0.5 292,287 - +1.0 292,287 - +0.1 292,287 - +0.0 292,465 + H281DRAFT_04175 0.28 +1.1 292,466 - H281DRAFT_04175 0.28 +0.2 292,466 - H281DRAFT_04175 0.28 -1.4 292,466 - H281DRAFT_04175 0.28 -0.0 292,851 + H281DRAFT_04175 0.81 -0.1
Or see this region's nucleotide sequence